Gene : Glyma.06G194100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER Genomic Order:  1941
Name:  ? Glyma.06G194100 Secondary Identifier:  ? PAC:30554254
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G194100 0.5kb upstream 0.5kb upstream 4744 true Chr06: 17300062-17304805 Glycine max
Glyma.06G194100 0.5kb upstream 0.5kb upstream 500 false Chr06: 17304306-17304805 Glycine max
Glyma.06G194100 0.5kb downstream 0.5kb downstream 4744 true Chr06: 17299562-17304305 Glycine max
Glyma.06G194100 0.5kb downstream 0.5kb downstream 500 false Chr06: 17299562-17300061 Glycine max
Glyma.06G194100 1.0kb upstream 1.0kb upstream 5244 true Chr06: 17300062-17305305 Glycine max
Glyma.06G194100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 17304306-17305305 Glycine max
Glyma.06G194100 1.0kb downstream 1.0kb downstream 5244 true Chr06: 17299062-17304305 Glycine max
Glyma.06G194100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 17299062-17300061 Glycine max
Glyma.06G194100 2.0kb upstream 2.0kb upstream 6244 true Chr06: 17300062-17306305 Glycine max
Glyma.06G194100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 17304306-17306305 Glycine max
Glyma.06G194100 2.0kb downstream 2.0kb downstream 6244 true Chr06: 17298062-17304305 Glycine max
Glyma.06G194100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 17298062-17300061 Glycine max
Glyma.06G194100 5.0kb upstream 5.0kb upstream 9244 true Chr06: 17300062-17309305 Glycine max
Glyma.06G194100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 17304306-17309305 Glycine max
Glyma.06G194100 5.0kb downstream 5.0kb downstream 9244 true Chr06: 17295062-17304305 Glycine max
Glyma.06G194100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 17295062-17300061 Glycine max
Glyma.06G194100 10.0kb upstream 10.0kb upstream 14244 true Chr06: 17300062-17314305 Glycine max
Glyma.06G194100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 17304306-17314305 Glycine max
Glyma.06G194100 10.0kb downstream 10.0kb downstream 14244 true Chr06: 17290062-17304305 Glycine max
Glyma.06G194100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 17290062-17300061 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121618074 5273 Angiosperm View MSA
122254897 5265 Fabidae View MSA
123996858 5270 Rosid View MSA
123571252 5271 Pentapetalae View MSA
122605980 5272 Eudicot View MSA
120890192 5274 Embryophyte View MSA
122930865 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.56865 0.0 24.7511    
cufflinks 5.5592 0.0 28.0383    
cufflinks 3.08181 0.0 19.448   Low
cufflinks 8.00841 0.0 35.7717    
cufflinks 10.7827 0.0 45.1107    
cufflinks 6.8923 0.0 28.0754    
cufflinks 13.6184 0.0 59.1112   High
cufflinks 9.48729 0.0 40.4069    
cufflinks 7.85001 0.0 35.6229    
cufflinks 0.41        
cufflinks 0.416        
cufflinks 0.29       Low
cufflinks 0.529        
cufflinks 0.762        
cufflinks 1.721       High
cufflinks 0.741        
cufflinks 0.192       Low
cufflinks 0.447        
cufflinks 0.337        
cufflinks 0.673        
cufflinks 0.34        
cufflinks 0.63        
cufflinks 0.681        
cufflinks 0.655        
cufflinks 0.661        
cufflinks 0.388        

0 Strain