Gene : Glyma.06G116700 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG4615 - Uncharacterized conserved protein Genomic Order:  1167
Name:  ? Glyma.06G116700 Secondary Identifier:  ? PAC:30550838
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G116700 0.5kb upstream 0.5kb upstream 4778 true Chr06: 9491155-9495932 Glycine max
Glyma.06G116700 0.5kb upstream 0.5kb upstream 500 false Chr06: 9495433-9495932 Glycine max
Glyma.06G116700 0.5kb downstream 0.5kb downstream 4778 true Chr06: 9490655-9495432 Glycine max
Glyma.06G116700 0.5kb downstream 0.5kb downstream 500 false Chr06: 9490655-9491154 Glycine max
Glyma.06G116700 1.0kb upstream 1.0kb upstream 5278 true Chr06: 9491155-9496432 Glycine max
Glyma.06G116700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9495433-9496432 Glycine max
Glyma.06G116700 1.0kb downstream 1.0kb downstream 5278 true Chr06: 9490155-9495432 Glycine max
Glyma.06G116700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9490155-9491154 Glycine max
Glyma.06G116700 2.0kb upstream 2.0kb upstream 6278 true Chr06: 9491155-9497432 Glycine max
Glyma.06G116700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9495433-9497432 Glycine max
Glyma.06G116700 2.0kb downstream 2.0kb downstream 6278 true Chr06: 9489155-9495432 Glycine max
Glyma.06G116700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9489155-9491154 Glycine max
Glyma.06G116700 5.0kb upstream 5.0kb upstream 9278 true Chr06: 9491155-9500432 Glycine max
Glyma.06G116700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9495433-9500432 Glycine max
Glyma.06G116700 5.0kb downstream 5.0kb downstream 9278 true Chr06: 9486155-9495432 Glycine max
Glyma.06G116700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9486155-9491154 Glycine max
Glyma.06G116700 10.0kb upstream 10.0kb upstream 14278 true Chr06: 9491155-9505432 Glycine max
Glyma.06G116700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9495433-9505432 Glycine max
Glyma.06G116700 10.0kb downstream 10.0kb downstream 14278 true Chr06: 9481155-9495432 Glycine max
Glyma.06G116700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9481155-9491154 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305106 5265 Fabidae View MSA
124067674 5270 Rosid View MSA
123737337 5271 Pentapetalae View MSA
122792320 5272 Eudicot View MSA
122045575 5273 Angiosperm View MSA
121346105 5274 Embryophyte View MSA
123380331 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.739 0.0 80.3392 High  
cufflinks 31.0305 0.0 83.5809 High  
cufflinks 14.387 0.0 41.0941   Low
cufflinks 29.9853 0.0 80.8632 High  
cufflinks 43.7301 0.0 116.726 High  
cufflinks 51.4918 0.0 137.411 High High
cufflinks 52.4878 0.0 140.057 High High
cufflinks 34.8807 0.0 93.5204 High  
cufflinks 32.7972 0.0 88.0974 High  
cufflinks 4.722        
cufflinks 1.525       Low
cufflinks 2.672        
cufflinks 5.627       High
cufflinks 7.877     High High
cufflinks 1.236       Low
cufflinks 3.753        
cufflinks 2.123        
cufflinks 4.229        
cufflinks 4.161        
cufflinks 3.525        
cufflinks 2.36        
cufflinks 3.854        
cufflinks 3.332        
cufflinks 2.111        
cufflinks 3.667        
cufflinks 2.69        

0 Strain