Gene : Glyma.06G095700 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11945:SF179 - MADS-BOX PROTEIN SVP Genomic Order:  957
Name:  ? Glyma.06G095700 Secondary Identifier:  ? PAC:30553122
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G095700 0.5kb upstream 0.5kb upstream 6523 true Chr06: 7561434-7567956 Glycine max
Glyma.06G095700 0.5kb upstream 0.5kb upstream 500 false Chr06: 7567457-7567956 Glycine max
Glyma.06G095700 0.5kb downstream 0.5kb downstream 6523 true Chr06: 7560934-7567456 Glycine max
Glyma.06G095700 0.5kb downstream 0.5kb downstream 500 false Chr06: 7560934-7561433 Glycine max
Glyma.06G095700 1.0kb upstream 1.0kb upstream 7023 true Chr06: 7561434-7568456 Glycine max
Glyma.06G095700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 7567457-7568456 Glycine max
Glyma.06G095700 1.0kb downstream 1.0kb downstream 7023 true Chr06: 7560434-7567456 Glycine max
Glyma.06G095700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 7560434-7561433 Glycine max
Glyma.06G095700 2.0kb upstream 2.0kb upstream 8023 true Chr06: 7561434-7569456 Glycine max
Glyma.06G095700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 7567457-7569456 Glycine max
Glyma.06G095700 2.0kb downstream 2.0kb downstream 8023 true Chr06: 7559434-7567456 Glycine max
Glyma.06G095700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 7559434-7561433 Glycine max
Glyma.06G095700 5.0kb upstream 5.0kb upstream 11023 true Chr06: 7561434-7572456 Glycine max
Glyma.06G095700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 7567457-7572456 Glycine max
Glyma.06G095700 5.0kb downstream 5.0kb downstream 11023 true Chr06: 7556434-7567456 Glycine max
Glyma.06G095700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 7556434-7561433 Glycine max
Glyma.06G095700 10.0kb upstream 10.0kb upstream 16023 true Chr06: 7561434-7577456 Glycine max
Glyma.06G095700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 7567457-7577456 Glycine max
Glyma.06G095700 10.0kb downstream 10.0kb downstream 16023 true Chr06: 7551434-7567456 Glycine max
Glyma.06G095700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 7551434-7561433 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121655816 5273 Angiosperm View MSA
122296432 5265 Fabidae View MSA
124035642 5270 Rosid View MSA
123609131 5271 Pentapetalae View MSA
122643781 5272 Eudicot View MSA
120927915 5274 Embryophyte View MSA
122968558 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.04156 0.0 38.1682    
cufflinks 14.9199 0.0 60.6611   High
cufflinks 0.993481 0.0 5.92714   Low
cufflinks 0.776667 0.0 4.82515   Low
cufflinks 3.8095 0.0 20.3996    
cufflinks 7.22388 0.0 30.8636    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.15282 0.0 15.5603    
cufflinks 5.32823 0.0 25.2465    
cufflinks 0.539        
cufflinks 1.244       High
cufflinks 0.055     Low Low
cufflinks 0.313        
cufflinks 0.129        
cufflinks 0.043     Low Low
cufflinks 0.921        
cufflinks 0.38        
cufflinks 0.03     Low Low
cufflinks 0.697        
cufflinks 0.759        
cufflinks 0.957        
cufflinks 0.69        
cufflinks 0.296        
cufflinks 1.105        
cufflinks 0.808        
cufflinks 0.686        

0 Strain