Gene : Glyma.06G085200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11062:SF108 - EXOSTOSIN FAMILY PROTEIN Genomic Order:  852
Name:  ? Glyma.06G085200 Secondary Identifier:  ? PAC:30552753
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5980 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G085200 0.5kb upstream 0.5kb upstream 5209 true Chr06: 6540349-6545557 Glycine max
Glyma.06G085200 0.5kb upstream 0.5kb upstream 500 false Chr06: 6540349-6540848 Glycine max
Glyma.06G085200 0.5kb downstream 0.5kb downstream 5209 true Chr06: 6540849-6546057 Glycine max
Glyma.06G085200 0.5kb downstream 0.5kb downstream 500 false Chr06: 6545558-6546057 Glycine max
Glyma.06G085200 1.0kb upstream 1.0kb upstream 5709 true Chr06: 6539849-6545557 Glycine max
Glyma.06G085200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6539849-6540848 Glycine max
Glyma.06G085200 1.0kb downstream 1.0kb downstream 5709 true Chr06: 6540849-6546557 Glycine max
Glyma.06G085200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6545558-6546557 Glycine max
Glyma.06G085200 2.0kb upstream 2.0kb upstream 6709 true Chr06: 6538849-6545557 Glycine max
Glyma.06G085200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6538849-6540848 Glycine max
Glyma.06G085200 2.0kb downstream 2.0kb downstream 6709 true Chr06: 6540849-6547557 Glycine max
Glyma.06G085200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6545558-6547557 Glycine max
Glyma.06G085200 5.0kb upstream 5.0kb upstream 9709 true Chr06: 6535849-6545557 Glycine max
Glyma.06G085200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6535849-6540848 Glycine max
Glyma.06G085200 5.0kb downstream 5.0kb downstream 9709 true Chr06: 6540849-6550557 Glycine max
Glyma.06G085200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6545558-6550557 Glycine max
Glyma.06G085200 10.0kb upstream 10.0kb upstream 14709 true Chr06: 6530849-6545557 Glycine max
Glyma.06G085200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6530849-6540848 Glycine max
Glyma.06G085200 10.0kb downstream 10.0kb downstream 14709 true Chr06: 6540849-6555557 Glycine max
Glyma.06G085200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6545558-6555557 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792376 5273 Angiosperm View MSA
122315003 5265 Fabidae View MSA
124067296 5270 Rosid View MSA
123744502 5271 Pentapetalae View MSA
122797581 5272 Eudicot View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.81724 0.0 24.3563    
cufflinks 3.7811 0.0 16.0875    
cufflinks 5.47864 0.0 19.9509    
cufflinks 7.75998 0.0 27.5427   High
cufflinks 3.67478 0.0 14.9242   Low
cufflinks 7.46152 0.0 26.913   High
cufflinks 6.55806 0.0 21.2121    
cufflinks 3.20749 0.0 15.3198   Low
cufflinks 5.06619 0.0 19.619    
cufflinks 1.217        
cufflinks 0.592       Low
cufflinks 0.948        
cufflinks 1.034        
cufflinks 0.758        
cufflinks 1.617       High
cufflinks 0.844        
cufflinks 1.797       High
cufflinks 1.401        
cufflinks 0.742        
cufflinks 0.777        
cufflinks 0.982        
cufflinks 0.947        
cufflinks 1.61       High
cufflinks 0.461       Low
cufflinks 0.723        
cufflinks 1.372        

0 Strain