Gene : Glyma.06G060800 G. max Wm82.a2.v1
Defline:  (1 of 3) PF00481//PF07228 - Protein phosphatase 2C (PP2C) // Stage II sporulation protein E (SpoIIE) (SpoIIE) Genomic Order:  608
Name:  ? Glyma.06G060800 Secondary Identifier:  ? PAC:30552639
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G060800 0.5kb upstream 0.5kb upstream 7060 true Chr06: 4593872-4600931 Glycine max
Glyma.06G060800 0.5kb upstream 0.5kb upstream 500 false Chr06: 4593872-4594371 Glycine max
Glyma.06G060800 0.5kb downstream 0.5kb downstream 7060 true Chr06: 4594372-4601431 Glycine max
Glyma.06G060800 0.5kb downstream 0.5kb downstream 500 false Chr06: 4600932-4601431 Glycine max
Glyma.06G060800 1.0kb upstream 1.0kb upstream 7560 true Chr06: 4593372-4600931 Glycine max
Glyma.06G060800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4593372-4594371 Glycine max
Glyma.06G060800 1.0kb downstream 1.0kb downstream 7560 true Chr06: 4594372-4601931 Glycine max
Glyma.06G060800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4600932-4601931 Glycine max
Glyma.06G060800 2.0kb upstream 2.0kb upstream 8560 true Chr06: 4592372-4600931 Glycine max
Glyma.06G060800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4592372-4594371 Glycine max
Glyma.06G060800 2.0kb downstream 2.0kb downstream 8560 true Chr06: 4594372-4602931 Glycine max
Glyma.06G060800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4600932-4602931 Glycine max
Glyma.06G060800 5.0kb upstream 5.0kb upstream 11560 true Chr06: 4589372-4600931 Glycine max
Glyma.06G060800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4589372-4594371 Glycine max
Glyma.06G060800 5.0kb downstream 5.0kb downstream 11560 true Chr06: 4594372-4605931 Glycine max
Glyma.06G060800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4600932-4605931 Glycine max
Glyma.06G060800 10.0kb upstream 10.0kb upstream 16560 true Chr06: 4584372-4600931 Glycine max
Glyma.06G060800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4584372-4594371 Glycine max
Glyma.06G060800 10.0kb downstream 10.0kb downstream 16560 true Chr06: 4594372-4610931 Glycine max
Glyma.06G060800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4600932-4610931 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301836 5265 Fabidae View MSA
124065029 5270 Rosid View MSA
123751315 5271 Pentapetalae View MSA
122787086 5272 Eudicot View MSA
122043479 5273 Angiosperm View MSA
123428982 5275 Viridiplantae View MSA
121350935 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.1626 0.0 119.097 High  
cufflinks 19.1079 0.0 81.096   Low
cufflinks 75.4017 0.0 405.56 High High
cufflinks 34.6938 0.0 153.624 High  
cufflinks 45.1581 0.0 204.815 High  
cufflinks 105.433 0.0 646.406 High High
cufflinks 21.2314 0.0 88.5593   Low
cufflinks 42.2493 0.0 187.693 High  
cufflinks 38.3029 0.0 166.443 High  
cufflinks 1.502        
cufflinks 1.907        
cufflinks 2.873       High
cufflinks 2.241       High
cufflinks 2.154       High
cufflinks 1.542        
cufflinks 0.947        
cufflinks 0.79       Low
cufflinks 1.346        
cufflinks 0.879       Low
cufflinks 1.349        
cufflinks 1.298        
cufflinks 1.225        
cufflinks 0.744       Low
cufflinks 1.406        
cufflinks 1.265        
cufflinks 0.947        

0 Strain