Gene : Glyma.06G040600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13375 - FMS INTERACTING PROTEIN Genomic Order:  406
Name:  ? Glyma.06G040600 Secondary Identifier:  ? PAC:30550908
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G040600 0.5kb upstream 0.5kb upstream 7467 true Chr06: 3047742-3055208 Glycine max
Glyma.06G040600 0.5kb upstream 0.5kb upstream 500 false Chr06: 3054709-3055208 Glycine max
Glyma.06G040600 0.5kb downstream 0.5kb downstream 7467 true Chr06: 3047242-3054708 Glycine max
Glyma.06G040600 0.5kb downstream 0.5kb downstream 500 false Chr06: 3047242-3047741 Glycine max
Glyma.06G040600 1.0kb upstream 1.0kb upstream 7967 true Chr06: 3047742-3055708 Glycine max
Glyma.06G040600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3054709-3055708 Glycine max
Glyma.06G040600 1.0kb downstream 1.0kb downstream 7967 true Chr06: 3046742-3054708 Glycine max
Glyma.06G040600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3046742-3047741 Glycine max
Glyma.06G040600 2.0kb upstream 2.0kb upstream 8967 true Chr06: 3047742-3056708 Glycine max
Glyma.06G040600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3054709-3056708 Glycine max
Glyma.06G040600 2.0kb downstream 2.0kb downstream 8967 true Chr06: 3045742-3054708 Glycine max
Glyma.06G040600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3045742-3047741 Glycine max
Glyma.06G040600 5.0kb upstream 5.0kb upstream 11967 true Chr06: 3047742-3059708 Glycine max
Glyma.06G040600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3054709-3059708 Glycine max
Glyma.06G040600 5.0kb downstream 5.0kb downstream 11967 true Chr06: 3042742-3054708 Glycine max
Glyma.06G040600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3042742-3047741 Glycine max
Glyma.06G040600 10.0kb upstream 10.0kb upstream 16967 true Chr06: 3047742-3064708 Glycine max
Glyma.06G040600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3054709-3064708 Glycine max
Glyma.06G040600 10.0kb downstream 10.0kb downstream 16967 true Chr06: 3037742-3054708 Glycine max
Glyma.06G040600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3037742-3047741 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307391 5265 Fabidae View MSA
124064206 5270 Rosid View MSA
123737010 5271 Pentapetalae View MSA
122786339 5272 Eudicot View MSA
122045756 5273 Angiosperm View MSA
121346778 5274 Embryophyte View MSA
123425483 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.47295 0.0 37.508   Low
cufflinks 14.4587 0.0 77.642   High
cufflinks 8.72237 0.0 38.4318    
cufflinks 8.69989 0.0 100.779    
cufflinks 10.6804 0.0 59.3731    
cufflinks 11.168 0.0 45.9881    
cufflinks 11.4796 0.0 92.8702    
cufflinks 10.7013 0.0 96.0451    
cufflinks 8.69349 0.0 49.0924    
cufflinks 2.904       High
cufflinks 0.987       Low
cufflinks 1.546        
cufflinks 2.161        
cufflinks 2.319        
cufflinks 1.047       Low
cufflinks 2.394        
cufflinks 1.362        
cufflinks 1.853        
cufflinks 2.841       High
cufflinks 2.16        
cufflinks 1.327        
cufflinks 2.437        
cufflinks 3.126       High
cufflinks 1.118       Low
cufflinks 2.14        
cufflinks 1.435        

0 Strain