Gene : Glyma.05G248200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31948:SF16 - ZINC-FINGER HOMEODOMAIN PROTEIN 14 Genomic Order:  2482
Name:  ? Glyma.05G248200 Secondary Identifier:  ? PAC:30524139
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G248200 0.5kb upstream 0.5kb upstream 1346 true Chr05: 42124919-42126264 Glycine max
Glyma.05G248200 0.5kb upstream 0.5kb upstream 500 false Chr05: 42125765-42126264 Glycine max
Glyma.05G248200 0.5kb downstream 0.5kb downstream 1346 true Chr05: 42124419-42125764 Glycine max
Glyma.05G248200 0.5kb downstream 0.5kb downstream 500 false Chr05: 42124419-42124918 Glycine max
Glyma.05G248200 1.0kb upstream 1.0kb upstream 1846 true Chr05: 42124919-42126764 Glycine max
Glyma.05G248200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 42125765-42126764 Glycine max
Glyma.05G248200 1.0kb downstream 1.0kb downstream 1846 true Chr05: 42123919-42125764 Glycine max
Glyma.05G248200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 42123919-42124918 Glycine max
Glyma.05G248200 2.0kb upstream 2.0kb upstream 2846 true Chr05: 42124919-42127764 Glycine max
Glyma.05G248200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 42125765-42127764 Glycine max
Glyma.05G248200 2.0kb downstream 2.0kb downstream 2846 true Chr05: 42122919-42125764 Glycine max
Glyma.05G248200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 42122919-42124918 Glycine max
Glyma.05G248200 5.0kb upstream 5.0kb upstream 5846 true Chr05: 42124919-42130764 Glycine max
Glyma.05G248200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 42125765-42130764 Glycine max
Glyma.05G248200 5.0kb downstream 5.0kb downstream 5846 true Chr05: 42119919-42125764 Glycine max
Glyma.05G248200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 42119919-42124918 Glycine max
Glyma.05G248200 10.0kb upstream 10.0kb upstream 10846 true Chr05: 42124919-42135764 Glycine max
Glyma.05G248200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 42125765-42135764 Glycine max
Glyma.05G248200 10.0kb downstream 10.0kb downstream 10846 true Chr05: 42114919-42125764 Glycine max
Glyma.05G248200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 42114919-42124918 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312843 5265 Fabidae View MSA
124069906 5270 Rosid View MSA
123742311 5271 Pentapetalae View MSA
122795389 5272 Eudicot View MSA
122049782 5273 Angiosperm View MSA
121347825 5274 Embryophyte View MSA
123380645 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.282467 0.0 1.11009   Low
cufflinks 16.0694 0.0 45.0066   High
cufflinks 2.21365 0.0 7.86399    
cufflinks 0.73128 0.0 2.76278    
cufflinks 2.95406 0.0 10.1896    
cufflinks 2.49812 0.0 8.76758    
cufflinks 2.61542 0.0 9.14347    
cufflinks 1.8812 0.0 6.76573    
cufflinks 0.401253 0.0 1.55662   Low
cufflinks 6.968        
cufflinks 0.251        
cufflinks 6.876        
cufflinks 0.095       Low
cufflinks 0.072     Low Low
cufflinks 0.801        
cufflinks 14.761     High  
cufflinks 0.033     Low Low
cufflinks 11.352     High  
cufflinks 9.551     High  
cufflinks 16.066     High High
cufflinks 0.539        
cufflinks 13.625     High  
cufflinks 13.913     High  
cufflinks 0.418        
cufflinks 16.05     High High
cufflinks 0.162       Low

0 Strain