Gene : Glyma.05G248100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11614:SF96 - ALPHA/BETA FOLD HYDROLASE FAMILY PROTEIN Genomic Order:  2481
Name:  ? Glyma.05G248100 Secondary Identifier:  ? PAC:30526065
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7420 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G248100 0.5kb upstream 0.5kb upstream 3528 true Chr05: 42117848-42121375 Glycine max
Glyma.05G248100 0.5kb upstream 0.5kb upstream 500 false Chr05: 42117848-42118347 Glycine max
Glyma.05G248100 0.5kb downstream 0.5kb downstream 3528 true Chr05: 42118348-42121875 Glycine max
Glyma.05G248100 0.5kb downstream 0.5kb downstream 500 false Chr05: 42121376-42121875 Glycine max
Glyma.05G248100 1.0kb upstream 1.0kb upstream 4028 true Chr05: 42117348-42121375 Glycine max
Glyma.05G248100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 42117348-42118347 Glycine max
Glyma.05G248100 1.0kb downstream 1.0kb downstream 4028 true Chr05: 42118348-42122375 Glycine max
Glyma.05G248100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 42121376-42122375 Glycine max
Glyma.05G248100 2.0kb upstream 2.0kb upstream 5028 true Chr05: 42116348-42121375 Glycine max
Glyma.05G248100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 42116348-42118347 Glycine max
Glyma.05G248100 2.0kb downstream 2.0kb downstream 5028 true Chr05: 42118348-42123375 Glycine max
Glyma.05G248100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 42121376-42123375 Glycine max
Glyma.05G248100 5.0kb upstream 5.0kb upstream 8028 true Chr05: 42113348-42121375 Glycine max
Glyma.05G248100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 42113348-42118347 Glycine max
Glyma.05G248100 5.0kb downstream 5.0kb downstream 8028 true Chr05: 42118348-42126375 Glycine max
Glyma.05G248100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 42121376-42126375 Glycine max
Glyma.05G248100 10.0kb upstream 10.0kb upstream 13028 true Chr05: 42108348-42121375 Glycine max
Glyma.05G248100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 42108348-42118347 Glycine max
Glyma.05G248100 10.0kb downstream 10.0kb downstream 13028 true Chr05: 42118348-42131375 Glycine max
Glyma.05G248100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 42121376-42131375 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122239292 5265 Fabidae Singleton cluster - no MSA
124038393 5270 Rosid View MSA
123753493 5271 Pentapetalae View MSA
122796454 5272 Eudicot View MSA
122051494 5273 Angiosperm View MSA
121350082 5274 Embryophyte View MSA
123428617 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.869866 0.0 6.78107   High
cufflinks 0.0215294 0.0 0.12522 Low Low
cufflinks 0.186622 0.0 0.736811 Low  
cufflinks 1.25474 0.0 11.0884   High
cufflinks 0.146141 0.0 0.593475 Low  
cufflinks 0.121394 0.0 0.488279 Low  
cufflinks 0.024743 0.0 0.134624 Low Low
cufflinks 0.002     Low Low
cufflinks 0.446       High
cufflinks 0.167        
cufflinks 0.007     Low Low
cufflinks 0.049     Low  
cufflinks 0.074        
cufflinks 0.1     Low  
cufflinks 0.002     Low Low
cufflinks 0.041     Low  
cufflinks 0.01     Low  
cufflinks 0.099        
cufflinks 0.16        
cufflinks 0.051     Low  
cufflinks 0.028     Low  
cufflinks 0.112        
cufflinks 0.129        
cufflinks 0.079        

0 Strain