Gene : Glyma.06G006700 G. max Wm82.a2.v1
Defline:  (1 of 252) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  67
Name:  ? Glyma.06G006700 Secondary Identifier:  ? PAC:30553863
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G006700 0.5kb upstream 0.5kb upstream 1028 true Chr06: 522200-523227 Glycine max
Glyma.06G006700 0.5kb upstream 0.5kb upstream 500 false Chr06: 522200-522699 Glycine max
Glyma.06G006700 0.5kb downstream 0.5kb downstream 1028 true Chr06: 522700-523727 Glycine max
Glyma.06G006700 0.5kb downstream 0.5kb downstream 500 false Chr06: 523228-523727 Glycine max
Glyma.06G006700 1.0kb upstream 1.0kb upstream 1528 true Chr06: 521700-523227 Glycine max
Glyma.06G006700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 521700-522699 Glycine max
Glyma.06G006700 1.0kb downstream 1.0kb downstream 1528 true Chr06: 522700-524227 Glycine max
Glyma.06G006700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 523228-524227 Glycine max
Glyma.06G006700 2.0kb upstream 2.0kb upstream 2528 true Chr06: 520700-523227 Glycine max
Glyma.06G006700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 520700-522699 Glycine max
Glyma.06G006700 2.0kb downstream 2.0kb downstream 2528 true Chr06: 522700-525227 Glycine max
Glyma.06G006700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 523228-525227 Glycine max
Glyma.06G006700 5.0kb upstream 5.0kb upstream 5528 true Chr06: 517700-523227 Glycine max
Glyma.06G006700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 517700-522699 Glycine max
Glyma.06G006700 5.0kb downstream 5.0kb downstream 5528 true Chr06: 522700-528227 Glycine max
Glyma.06G006700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 523228-528227 Glycine max
Glyma.06G006700 10.0kb upstream 10.0kb upstream 10528 true Chr06: 512700-523227 Glycine max
Glyma.06G006700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 512700-522699 Glycine max
Glyma.06G006700 10.0kb downstream 10.0kb downstream 10528 true Chr06: 522700-533227 Glycine max
Glyma.06G006700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 523228-533227 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313902 5265 Fabidae View MSA
124073380 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.303486 0.0 1.22386    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 8.0502 0.0 26.9588   High
cufflinks 0.191257 0.0 0.787635    
cufflinks 0.0502587 0.0 0.230897 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.155901 0.0 0.65098 Low  
cufflinks 2.43648 0.0 8.99316   High
cufflinks 0.116936 0.0 0.498364 Low  
cufflinks 3.751       High
cufflinks 0.104        
cufflinks 1.735        
cufflinks 0.062     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.101        
cufflinks 5.599       High
cufflinks 0.485        
cufflinks 1.759        
cufflinks 0.03     Low Low
cufflinks 2.188        
cufflinks 0.04     Low Low
cufflinks 2.507        
cufflinks 1.024        
cufflinks 0.102        
cufflinks 3.509       High
cufflinks 0.173        

0 Strain