Gene : Glyma.06G006200 G. max Wm82.a2.v1
Defline:  (1 of 252) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  62
Name:  ? Glyma.06G006200 Secondary Identifier:  ? PAC:30553292
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G006200 0.5kb upstream 0.5kb upstream 791 true Chr06: 499305-500095 Glycine max
Glyma.06G006200 0.5kb upstream 0.5kb upstream 500 false Chr06: 499305-499804 Glycine max
Glyma.06G006200 0.5kb downstream 0.5kb downstream 791 true Chr06: 499805-500595 Glycine max
Glyma.06G006200 0.5kb downstream 0.5kb downstream 500 false Chr06: 500096-500595 Glycine max
Glyma.06G006200 1.0kb upstream 1.0kb upstream 1291 true Chr06: 498805-500095 Glycine max
Glyma.06G006200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 498805-499804 Glycine max
Glyma.06G006200 1.0kb downstream 1.0kb downstream 1291 true Chr06: 499805-501095 Glycine max
Glyma.06G006200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 500096-501095 Glycine max
Glyma.06G006200 2.0kb upstream 2.0kb upstream 2291 true Chr06: 497805-500095 Glycine max
Glyma.06G006200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 497805-499804 Glycine max
Glyma.06G006200 2.0kb downstream 2.0kb downstream 2291 true Chr06: 499805-502095 Glycine max
Glyma.06G006200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 500096-502095 Glycine max
Glyma.06G006200 5.0kb upstream 5.0kb upstream 5291 true Chr06: 494805-500095 Glycine max
Glyma.06G006200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 494805-499804 Glycine max
Glyma.06G006200 5.0kb downstream 5.0kb downstream 5291 true Chr06: 499805-505095 Glycine max
Glyma.06G006200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 500096-505095 Glycine max
Glyma.06G006200 10.0kb upstream 10.0kb upstream 10291 true Chr06: 489805-500095 Glycine max
Glyma.06G006200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 489805-499804 Glycine max
Glyma.06G006200 10.0kb downstream 10.0kb downstream 10291 true Chr06: 499805-510095 Glycine max
Glyma.06G006200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 500096-510095 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313902 5265 Fabidae View MSA
124073380 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0898097 0.0 0.431808 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.161299 0.0 0.730035 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.362       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.06     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.117        
cufflinks 0.054     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.414       High
cufflinks 0.098        

0 Strain