Gene : Glyma.06G003000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12596:SF2 - RAN-BINDING PROTEIN 16 Genomic Order:  30
Name:  ? Glyma.06G003000 Secondary Identifier:  ? PAC:30553470
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G003000 0.5kb upstream 0.5kb upstream 21806 true Chr06: 236797-258602 Glycine max
Glyma.06G003000 0.5kb upstream 0.5kb upstream 500 false Chr06: 258103-258602 Glycine max
Glyma.06G003000 0.5kb downstream 0.5kb downstream 21806 true Chr06: 236297-258102 Glycine max
Glyma.06G003000 0.5kb downstream 0.5kb downstream 500 false Chr06: 236297-236796 Glycine max
Glyma.06G003000 1.0kb upstream 1.0kb upstream 22306 true Chr06: 236797-259102 Glycine max
Glyma.06G003000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 258103-259102 Glycine max
Glyma.06G003000 1.0kb downstream 1.0kb downstream 22306 true Chr06: 235797-258102 Glycine max
Glyma.06G003000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 235797-236796 Glycine max
Glyma.06G003000 2.0kb upstream 2.0kb upstream 23306 true Chr06: 236797-260102 Glycine max
Glyma.06G003000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 258103-260102 Glycine max
Glyma.06G003000 2.0kb downstream 2.0kb downstream 23306 true Chr06: 234797-258102 Glycine max
Glyma.06G003000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 234797-236796 Glycine max
Glyma.06G003000 5.0kb upstream 5.0kb upstream 26306 true Chr06: 236797-263102 Glycine max
Glyma.06G003000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 258103-263102 Glycine max
Glyma.06G003000 5.0kb downstream 5.0kb downstream 26306 true Chr06: 231797-258102 Glycine max
Glyma.06G003000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 231797-236796 Glycine max
Glyma.06G003000 10.0kb upstream 10.0kb upstream 31306 true Chr06: 236797-268102 Glycine max
Glyma.06G003000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 258103-268102 Glycine max
Glyma.06G003000 10.0kb downstream 10.0kb downstream 31306 true Chr06: 226797-258102 Glycine max
Glyma.06G003000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 226797-236796 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304945 5265 Fabidae View MSA
124066817 5270 Rosid View MSA
123737109 5271 Pentapetalae View MSA
122790636 5272 Eudicot View MSA
122043679 5273 Angiosperm View MSA
121344898 5274 Embryophyte View MSA
123423878 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.52782 0.0 18.2054    
cufflinks 4.40568 0.0 27.7431    
cufflinks 10.2902 0.0 53.5317   High
cufflinks 5.52449 0.0 37.7733    
cufflinks 5.19636 0.0 40.9707    
cufflinks 4.92751 0.0 34.692    
cufflinks 4.55493 0.0 26.9133    
cufflinks 4.60717 0.0 18.1413    
cufflinks 8.51527 0.0 46.2009   High
cufflinks 0.093     Low  
cufflinks 0.075        
cufflinks 0.121       High
cufflinks 0.102        
cufflinks 0.11        
cufflinks 0.17       High
cufflinks 0.081     Low  
cufflinks 0.076        
cufflinks 0.128       High
cufflinks 0.096     Low  
cufflinks 0.082     Low  
cufflinks 0.072       Low
cufflinks 0.085     Low  
cufflinks 0.078     Low  
cufflinks 0.09        
cufflinks 0.076     Low  
cufflinks 0.084        

0 Strain