Gene : Glyma.05G225900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33172:SF2 - EMB Genomic Order:  2259
Name:  ? Glyma.05G225900 Secondary Identifier:  ? PAC:30524767
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G225900 0.5kb upstream 0.5kb upstream 1762 true Chr05: 40451389-40453150 Glycine max
Glyma.05G225900 0.5kb upstream 0.5kb upstream 500 false Chr05: 40451389-40451888 Glycine max
Glyma.05G225900 0.5kb downstream 0.5kb downstream 1762 true Chr05: 40451889-40453650 Glycine max
Glyma.05G225900 0.5kb downstream 0.5kb downstream 500 false Chr05: 40453151-40453650 Glycine max
Glyma.05G225900 1.0kb upstream 1.0kb upstream 2262 true Chr05: 40450889-40453150 Glycine max
Glyma.05G225900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40450889-40451888 Glycine max
Glyma.05G225900 1.0kb downstream 1.0kb downstream 2262 true Chr05: 40451889-40454150 Glycine max
Glyma.05G225900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40453151-40454150 Glycine max
Glyma.05G225900 2.0kb upstream 2.0kb upstream 3262 true Chr05: 40449889-40453150 Glycine max
Glyma.05G225900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40449889-40451888 Glycine max
Glyma.05G225900 2.0kb downstream 2.0kb downstream 3262 true Chr05: 40451889-40455150 Glycine max
Glyma.05G225900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40453151-40455150 Glycine max
Glyma.05G225900 5.0kb upstream 5.0kb upstream 6262 true Chr05: 40446889-40453150 Glycine max
Glyma.05G225900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40446889-40451888 Glycine max
Glyma.05G225900 5.0kb downstream 5.0kb downstream 6262 true Chr05: 40451889-40458150 Glycine max
Glyma.05G225900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40453151-40458150 Glycine max
Glyma.05G225900 10.0kb upstream 10.0kb upstream 11262 true Chr05: 40441889-40453150 Glycine max
Glyma.05G225900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40441889-40451888 Glycine max
Glyma.05G225900 10.0kb downstream 10.0kb downstream 11262 true Chr05: 40451889-40463150 Glycine max
Glyma.05G225900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40453151-40463150 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311637 5265 Fabidae View MSA
124074077 5270 Rosid View MSA
123750402 5271 Pentapetalae View MSA
122795824 5272 Eudicot View MSA
122046186 5273 Angiosperm View MSA
121310570 5274 Embryophyte View MSA
123348021 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.91645 0.0 12.8861    
cufflinks 2.28142 0.0 7.95093    
cufflinks 20.2454 0.0 54.6119 High High
cufflinks 0.30626 0.0 1.19145   Low
cufflinks 1.5253 0.0 5.50055    
cufflinks 5.88191 0.0 18.2528    
cufflinks 0.216825 0.0 0.8562   Low
cufflinks 0.765023 0.0 2.85786    
cufflinks 3.81887 0.0 12.5669    
cufflinks 9.347     High  
cufflinks 206.462     High High
cufflinks 10.492     High  
cufflinks 3.66       Low
cufflinks 2.805       Low
cufflinks 78.546     High  
cufflinks 87.786     High  
cufflinks 13.882     High  
cufflinks 3.887       Low
cufflinks 10.033     High  
cufflinks 109.331     High  
cufflinks 114.332     High  
cufflinks 39.146     High  
cufflinks 20.31     High  
cufflinks 92.689     High  
cufflinks 100.369     High  
cufflinks 120.868     High  

0 Strain