Gene : Glyma.05G232700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11005:SF17 - AB-HYDROLASE ASSOCIATED LIPASE REGION CONTAINING PROTEIN Genomic Order:  2327
Name:  ? Glyma.05G232700 Secondary Identifier:  ? PAC:30525012
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPAS-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G232700 0.5kb upstream 0.5kb upstream 4579 true Chr05: 41017569-41022147 Glycine max
Glyma.05G232700 0.5kb upstream 0.5kb upstream 500 false Chr05: 41021648-41022147 Glycine max
Glyma.05G232700 0.5kb downstream 0.5kb downstream 4579 true Chr05: 41017069-41021647 Glycine max
Glyma.05G232700 0.5kb downstream 0.5kb downstream 500 false Chr05: 41017069-41017568 Glycine max
Glyma.05G232700 1.0kb upstream 1.0kb upstream 5079 true Chr05: 41017569-41022647 Glycine max
Glyma.05G232700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41021648-41022647 Glycine max
Glyma.05G232700 1.0kb downstream 1.0kb downstream 5079 true Chr05: 41016569-41021647 Glycine max
Glyma.05G232700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41016569-41017568 Glycine max
Glyma.05G232700 2.0kb upstream 2.0kb upstream 6079 true Chr05: 41017569-41023647 Glycine max
Glyma.05G232700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41021648-41023647 Glycine max
Glyma.05G232700 2.0kb downstream 2.0kb downstream 6079 true Chr05: 41015569-41021647 Glycine max
Glyma.05G232700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41015569-41017568 Glycine max
Glyma.05G232700 5.0kb upstream 5.0kb upstream 9079 true Chr05: 41017569-41026647 Glycine max
Glyma.05G232700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41021648-41026647 Glycine max
Glyma.05G232700 5.0kb downstream 5.0kb downstream 9079 true Chr05: 41012569-41021647 Glycine max
Glyma.05G232700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41012569-41017568 Glycine max
Glyma.05G232700 10.0kb upstream 10.0kb upstream 14079 true Chr05: 41017569-41031647 Glycine max
Glyma.05G232700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41021648-41031647 Glycine max
Glyma.05G232700 10.0kb downstream 10.0kb downstream 14079 true Chr05: 41007569-41021647 Glycine max
Glyma.05G232700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41007569-41017568 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310904 5265 Fabidae View MSA
124066450 5270 Rosid View MSA
123737707 5271 Pentapetalae View MSA
122787055 5272 Eudicot View MSA
122042317 5273 Angiosperm View MSA
121351096 5274 Embryophyte View MSA
123425958 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.305441 0.0 1.49228   Low
cufflinks 0.818603 0.0 4.76285    
cufflinks 0.577209 0.0 2.55678    
cufflinks 1.23138 0.0 4.65682    
cufflinks 1.67525 0.0 9.78012    
cufflinks 1.42322 0.0 5.14792    
cufflinks 24.043 0.0 86.7003 High High
cufflinks 1.06082 0.0 5.75381    
cufflinks 0.763499 0.0 3.32211    
cufflinks 0.238        
cufflinks 0.373       High
cufflinks 0.224        
cufflinks 0.462       High
cufflinks 0.305        
cufflinks 0.172        
cufflinks 0.2        
cufflinks 0.118       Low
cufflinks 0.356       High
cufflinks 0.227        
cufflinks 0.181        
cufflinks 0.249        
cufflinks 0.206        
cufflinks 0.178        
cufflinks 0.209        
cufflinks 0.193        
cufflinks 0.31        

0 Strain