Gene : Glyma.05G229300 G. max Wm82.a2.v1
Defline:  (1 of 98) PF02309 - AUX/IAA family (AUX_IAA) Genomic Order:  2293
Name:  ? Glyma.05G229300 Secondary Identifier:  ? PAC:30524133
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G229300 0.5kb upstream 0.5kb upstream 3553 true Chr05: 40691687-40695239 Glycine max
Glyma.05G229300 0.5kb upstream 0.5kb upstream 500 false Chr05: 40694740-40695239 Glycine max
Glyma.05G229300 0.5kb downstream 0.5kb downstream 3553 true Chr05: 40691187-40694739 Glycine max
Glyma.05G229300 0.5kb downstream 0.5kb downstream 500 false Chr05: 40691187-40691686 Glycine max
Glyma.05G229300 1.0kb upstream 1.0kb upstream 4053 true Chr05: 40691687-40695739 Glycine max
Glyma.05G229300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40694740-40695739 Glycine max
Glyma.05G229300 1.0kb downstream 1.0kb downstream 4053 true Chr05: 40690687-40694739 Glycine max
Glyma.05G229300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40690687-40691686 Glycine max
Glyma.05G229300 2.0kb upstream 2.0kb upstream 5053 true Chr05: 40691687-40696739 Glycine max
Glyma.05G229300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40694740-40696739 Glycine max
Glyma.05G229300 2.0kb downstream 2.0kb downstream 5053 true Chr05: 40689687-40694739 Glycine max
Glyma.05G229300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40689687-40691686 Glycine max
Glyma.05G229300 5.0kb upstream 5.0kb upstream 8053 true Chr05: 40691687-40699739 Glycine max
Glyma.05G229300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40694740-40699739 Glycine max
Glyma.05G229300 5.0kb downstream 5.0kb downstream 8053 true Chr05: 40686687-40694739 Glycine max
Glyma.05G229300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40686687-40691686 Glycine max
Glyma.05G229300 10.0kb upstream 10.0kb upstream 13053 true Chr05: 40691687-40704739 Glycine max
Glyma.05G229300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40694740-40704739 Glycine max
Glyma.05G229300 10.0kb downstream 10.0kb downstream 13053 true Chr05: 40681687-40694739 Glycine max
Glyma.05G229300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40681687-40691686 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308541 5265 Fabidae View MSA
124070814 5270 Rosid View MSA
123750768 5271 Pentapetalae View MSA
122791591 5272 Eudicot View MSA
122051273 5273 Angiosperm View MSA
121350717 5274 Embryophyte View MSA
123381856 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.03449 0.0 24.9859    
cufflinks 21.4221 0.0 57.1535 High  
cufflinks 4.1931 0.0 12.6126   Low
cufflinks 11.2759 0.0 30.6453    
cufflinks 15.2498 0.0 40.9069    
cufflinks 7.50508 0.0 21.0975    
cufflinks 18.7805 0.0 50.1361    
cufflinks 73.3123 0.0 213.723 High High
cufflinks 10.733 0.0 29.2588    
cufflinks 31.486     High High
cufflinks 3.811       Low
cufflinks 6.487        
cufflinks 8.443     High  
cufflinks 12.028     High  
cufflinks 3.343       Low
cufflinks 10.447     High  
cufflinks 6.895     High  
cufflinks 10.681     High  
cufflinks 10.435     High  
cufflinks 7.72     High  
cufflinks 8.344     High  
cufflinks 10.215     High  
cufflinks 12.336     High  
cufflinks 4.167       Low
cufflinks 9.518     High  
cufflinks 6.912     High  

0 Strain