Gene : Glyma.05G239300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11566:SF80 - DYNAMIN-RELATED PROTEIN 1C Genomic Order:  2393
Name:  ? Glyma.05G239300 Secondary Identifier:  ? PAC:30524819
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G239300 0.5kb upstream 0.5kb upstream 7339 true Chr05: 41501576-41508914 Glycine max
Glyma.05G239300 0.5kb upstream 0.5kb upstream 500 false Chr05: 41501576-41502075 Glycine max
Glyma.05G239300 0.5kb downstream 0.5kb downstream 7339 true Chr05: 41502076-41509414 Glycine max
Glyma.05G239300 0.5kb downstream 0.5kb downstream 500 false Chr05: 41508915-41509414 Glycine max
Glyma.05G239300 1.0kb upstream 1.0kb upstream 7839 true Chr05: 41501076-41508914 Glycine max
Glyma.05G239300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41501076-41502075 Glycine max
Glyma.05G239300 1.0kb downstream 1.0kb downstream 7839 true Chr05: 41502076-41509914 Glycine max
Glyma.05G239300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41508915-41509914 Glycine max
Glyma.05G239300 2.0kb upstream 2.0kb upstream 8839 true Chr05: 41500076-41508914 Glycine max
Glyma.05G239300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41500076-41502075 Glycine max
Glyma.05G239300 2.0kb downstream 2.0kb downstream 8839 true Chr05: 41502076-41510914 Glycine max
Glyma.05G239300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41508915-41510914 Glycine max
Glyma.05G239300 5.0kb upstream 5.0kb upstream 11839 true Chr05: 41497076-41508914 Glycine max
Glyma.05G239300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41497076-41502075 Glycine max
Glyma.05G239300 5.0kb downstream 5.0kb downstream 11839 true Chr05: 41502076-41513914 Glycine max
Glyma.05G239300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41508915-41513914 Glycine max
Glyma.05G239300 10.0kb upstream 10.0kb upstream 16839 true Chr05: 41492076-41508914 Glycine max
Glyma.05G239300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41492076-41502075 Glycine max
Glyma.05G239300 10.0kb downstream 10.0kb downstream 16839 true Chr05: 41502076-41518914 Glycine max
Glyma.05G239300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41508915-41518914 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303458 5265 Fabidae View MSA
124061748 5270 Rosid View MSA
123749597 5271 Pentapetalae View MSA
122793437 5272 Eudicot View MSA
122046512 5273 Angiosperm View MSA
121348434 5274 Embryophyte View MSA
123428236 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0466 0.0 61.8003   Low
cufflinks 21.9228 0.0 82.6707 High  
cufflinks 14.9346 0.0 55.2079   Low
cufflinks 31.7148 0.0 145.514 High  
cufflinks 35.1141 0.0 146.351 High  
cufflinks 43.306 0.0 192.017 High High
cufflinks 12.5735 0.0 46.2798   Low
cufflinks 36.5145 0.0 173.579 High  
cufflinks 27.0684 0.0 117.448 High  
cufflinks 6.091       High
cufflinks 1.412       Low
cufflinks 2.883        
cufflinks 6.61       High
cufflinks 7.298     High High
cufflinks 0.899       Low
cufflinks 3.638        
cufflinks 2.82        
cufflinks 5.347        
cufflinks 3.944        
cufflinks 2.688        
cufflinks 2.431        
cufflinks 3.106        
cufflinks 3.502        
cufflinks 2.339        
cufflinks 3.058        
cufflinks 3.227        

0 Strain