Gene : Glyma.05G236400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22298:SF28 - ENDOGLUCANASE 4-RELATED Genomic Order:  2364
Name:  ? Glyma.05G236400 Secondary Identifier:  ? PAC:30526281
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G236400 0.5kb upstream 0.5kb upstream 5603 true Chr05: 41274513-41280115 Glycine max
Glyma.05G236400 0.5kb upstream 0.5kb upstream 500 false Chr05: 41279616-41280115 Glycine max
Glyma.05G236400 0.5kb downstream 0.5kb downstream 5603 true Chr05: 41274013-41279615 Glycine max
Glyma.05G236400 0.5kb downstream 0.5kb downstream 500 false Chr05: 41274013-41274512 Glycine max
Glyma.05G236400 1.0kb upstream 1.0kb upstream 6103 true Chr05: 41274513-41280615 Glycine max
Glyma.05G236400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41279616-41280615 Glycine max
Glyma.05G236400 1.0kb downstream 1.0kb downstream 6103 true Chr05: 41273513-41279615 Glycine max
Glyma.05G236400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41273513-41274512 Glycine max
Glyma.05G236400 2.0kb upstream 2.0kb upstream 7103 true Chr05: 41274513-41281615 Glycine max
Glyma.05G236400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41279616-41281615 Glycine max
Glyma.05G236400 2.0kb downstream 2.0kb downstream 7103 true Chr05: 41272513-41279615 Glycine max
Glyma.05G236400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41272513-41274512 Glycine max
Glyma.05G236400 5.0kb upstream 5.0kb upstream 10103 true Chr05: 41274513-41284615 Glycine max
Glyma.05G236400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41279616-41284615 Glycine max
Glyma.05G236400 5.0kb downstream 5.0kb downstream 10103 true Chr05: 41269513-41279615 Glycine max
Glyma.05G236400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41269513-41274512 Glycine max
Glyma.05G236400 10.0kb upstream 10.0kb upstream 15103 true Chr05: 41274513-41289615 Glycine max
Glyma.05G236400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41279616-41289615 Glycine max
Glyma.05G236400 10.0kb downstream 10.0kb downstream 15103 true Chr05: 41264513-41279615 Glycine max
Glyma.05G236400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41264513-41274512 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299426 5265 Fabidae View MSA
124074876 5270 Rosid View MSA
123753094 5271 Pentapetalae View MSA
122792910 5272 Eudicot View MSA
122045461 5273 Angiosperm View MSA
121349892 5274 Embryophyte View MSA
123381487 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.350589 0.0 1.30599   Low
cufflinks 8.74195 0.0 23.7241    
cufflinks 1.10016 0.0 3.8222   Low
cufflinks 6.36755 0.0 17.6574    
cufflinks 9.85661 0.0 26.4711    
cufflinks 2.9556 0.0 8.93651    
cufflinks 6.32687 0.0 17.453    
cufflinks 12.1617 0.0 32.5338    
cufflinks 9.43885 0.0 25.4462    
cufflinks 1.701        
cufflinks 0.226       Low
cufflinks 0.756        
cufflinks 1.716        
cufflinks 2.304        
cufflinks 1.308        
cufflinks 3.669       High
cufflinks 0.656        
cufflinks 1.094        
cufflinks 3.576       High
cufflinks 5.177       High
cufflinks 0.419       Low
cufflinks 2.839        
cufflinks 2.667        
cufflinks 0.277       Low
cufflinks 4.205       High
cufflinks 0.517        

0 Strain