Gene : Glyma.05G235700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32227:SF61 - GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 3 Genomic Order:  2357
Name:  ? Glyma.05G235700 Secondary Identifier:  ? PAC:30524069
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G235700 0.5kb upstream 0.5kb upstream 4761 true Chr05: 41238185-41242945 Glycine max
Glyma.05G235700 0.5kb upstream 0.5kb upstream 500 false Chr05: 41238185-41238684 Glycine max
Glyma.05G235700 0.5kb downstream 0.5kb downstream 4761 true Chr05: 41238685-41243445 Glycine max
Glyma.05G235700 0.5kb downstream 0.5kb downstream 500 false Chr05: 41242946-41243445 Glycine max
Glyma.05G235700 1.0kb upstream 1.0kb upstream 5261 true Chr05: 41237685-41242945 Glycine max
Glyma.05G235700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41237685-41238684 Glycine max
Glyma.05G235700 1.0kb downstream 1.0kb downstream 5261 true Chr05: 41238685-41243945 Glycine max
Glyma.05G235700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41242946-41243945 Glycine max
Glyma.05G235700 2.0kb upstream 2.0kb upstream 6261 true Chr05: 41236685-41242945 Glycine max
Glyma.05G235700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41236685-41238684 Glycine max
Glyma.05G235700 2.0kb downstream 2.0kb downstream 6261 true Chr05: 41238685-41244945 Glycine max
Glyma.05G235700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41242946-41244945 Glycine max
Glyma.05G235700 5.0kb upstream 5.0kb upstream 9261 true Chr05: 41233685-41242945 Glycine max
Glyma.05G235700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41233685-41238684 Glycine max
Glyma.05G235700 5.0kb downstream 5.0kb downstream 9261 true Chr05: 41238685-41247945 Glycine max
Glyma.05G235700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41242946-41247945 Glycine max
Glyma.05G235700 10.0kb upstream 10.0kb upstream 14261 true Chr05: 41228685-41242945 Glycine max
Glyma.05G235700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41228685-41238684 Glycine max
Glyma.05G235700 10.0kb downstream 10.0kb downstream 14261 true Chr05: 41238685-41252945 Glycine max
Glyma.05G235700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41242946-41252945 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302522 5265 Fabidae View MSA
124061545 5270 Rosid View MSA
123741211 5271 Pentapetalae View MSA
122791300 5272 Eudicot View MSA
122043027 5273 Angiosperm View MSA
121351661 5274 Embryophyte View MSA
123382266 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.383676 0.0 1.93548   Low
cufflinks 2.83972 0.0 16.5365    
cufflinks 1.32311 0.0 7.90331    
cufflinks 1.74159 0.0 13.6801    
cufflinks 2.5854 0.0 13.3005    
cufflinks 1.6477 0.0 10.55    
cufflinks 2.83371 0.0 17.3888    
cufflinks 2.33773 0.0 14.8598    
cufflinks 1.89985 0.0 10.6528    
cufflinks 0.6       High
cufflinks 0.023     Low Low
cufflinks 0.1     Low  
cufflinks 0.289        
cufflinks 0.371       High
cufflinks 0.234        
cufflinks 0.149        
cufflinks 0.115        
cufflinks 0.172        
cufflinks 0.379       High
cufflinks 0.155        
cufflinks 0.032     Low Low
cufflinks 0.155        
cufflinks 0.395       High
cufflinks 0.029     Low Low
cufflinks 0.131        
cufflinks 0.111        

0 Strain