Gene : Glyma.05G197700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24343:SF161 - SERINE/THREONINE-PROTEIN KINASE SRK2J Genomic Order:  1977
Name:  ? Glyma.05G197700 Secondary Identifier:  ? PAC:30525902
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G197700 0.5kb upstream 0.5kb upstream 4603 true Chr05: 38187821-38192423 Glycine max
Glyma.05G197700 0.5kb upstream 0.5kb upstream 500 false Chr05: 38191924-38192423 Glycine max
Glyma.05G197700 0.5kb downstream 0.5kb downstream 4603 true Chr05: 38187321-38191923 Glycine max
Glyma.05G197700 0.5kb downstream 0.5kb downstream 500 false Chr05: 38187321-38187820 Glycine max
Glyma.05G197700 1.0kb upstream 1.0kb upstream 5103 true Chr05: 38187821-38192923 Glycine max
Glyma.05G197700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38191924-38192923 Glycine max
Glyma.05G197700 1.0kb downstream 1.0kb downstream 5103 true Chr05: 38186821-38191923 Glycine max
Glyma.05G197700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38186821-38187820 Glycine max
Glyma.05G197700 2.0kb upstream 2.0kb upstream 6103 true Chr05: 38187821-38193923 Glycine max
Glyma.05G197700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38191924-38193923 Glycine max
Glyma.05G197700 2.0kb downstream 2.0kb downstream 6103 true Chr05: 38185821-38191923 Glycine max
Glyma.05G197700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38185821-38187820 Glycine max
Glyma.05G197700 5.0kb upstream 5.0kb upstream 9103 true Chr05: 38187821-38196923 Glycine max
Glyma.05G197700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38191924-38196923 Glycine max
Glyma.05G197700 5.0kb downstream 5.0kb downstream 9103 true Chr05: 38182821-38191923 Glycine max
Glyma.05G197700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38182821-38187820 Glycine max
Glyma.05G197700 10.0kb upstream 10.0kb upstream 14103 true Chr05: 38187821-38201923 Glycine max
Glyma.05G197700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38191924-38201923 Glycine max
Glyma.05G197700 10.0kb downstream 10.0kb downstream 14103 true Chr05: 38177821-38191923 Glycine max
Glyma.05G197700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38177821-38187820 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298245 5265 Fabidae View MSA
124073506 5270 Rosid View MSA
123753521 5271 Pentapetalae View MSA
122797928 5272 Eudicot View MSA
122051434 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.18355 0.0 17.3652   Low
cufflinks 11.734 0.0 31.5135    
cufflinks 6.76783 0.0 18.7605   Low
cufflinks 14.0624 0.0 37.5709    
cufflinks 16.1429 0.0 43.0741    
cufflinks 11.1182 0.0 29.9204    
cufflinks 14.2885 0.0 38.1807    
cufflinks 20.2036 0.0 54.0028   High
cufflinks 9.94483 0.0 26.9005    
cufflinks 7.532       High
cufflinks 1.701       Low
cufflinks 5.426        
cufflinks 6.091        
cufflinks 9.493     High High
cufflinks 1.97        
cufflinks 2.89        
cufflinks 3.708        
cufflinks 9.724     High High
cufflinks 5.527        
cufflinks 2.356        
cufflinks 1.868       Low
cufflinks 3.135        
cufflinks 2.483        
cufflinks 2.117        
cufflinks 2.273        
cufflinks 2.471        

0 Strain