Gene : Glyma.05G178900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11384//PTHR11384:SF30 - ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER Genomic Order:  1789
Name:  ? Glyma.05G178900 Secondary Identifier:  ? PAC:30525142
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G178900 0.5kb upstream 0.5kb upstream 21721 true Chr05: 36683487-36705207 Glycine max
Glyma.05G178900 0.5kb upstream 0.5kb upstream 500 false Chr05: 36704708-36705207 Glycine max
Glyma.05G178900 0.5kb downstream 0.5kb downstream 21721 true Chr05: 36682987-36704707 Glycine max
Glyma.05G178900 0.5kb downstream 0.5kb downstream 500 false Chr05: 36682987-36683486 Glycine max
Glyma.05G178900 1.0kb upstream 1.0kb upstream 22221 true Chr05: 36683487-36705707 Glycine max
Glyma.05G178900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36704708-36705707 Glycine max
Glyma.05G178900 1.0kb downstream 1.0kb downstream 22221 true Chr05: 36682487-36704707 Glycine max
Glyma.05G178900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36682487-36683486 Glycine max
Glyma.05G178900 2.0kb upstream 2.0kb upstream 23221 true Chr05: 36683487-36706707 Glycine max
Glyma.05G178900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36704708-36706707 Glycine max
Glyma.05G178900 2.0kb downstream 2.0kb downstream 23221 true Chr05: 36681487-36704707 Glycine max
Glyma.05G178900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36681487-36683486 Glycine max
Glyma.05G178900 5.0kb upstream 5.0kb upstream 26221 true Chr05: 36683487-36709707 Glycine max
Glyma.05G178900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36704708-36709707 Glycine max
Glyma.05G178900 5.0kb downstream 5.0kb downstream 26221 true Chr05: 36678487-36704707 Glycine max
Glyma.05G178900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36678487-36683486 Glycine max
Glyma.05G178900 10.0kb upstream 10.0kb upstream 31221 true Chr05: 36683487-36714707 Glycine max
Glyma.05G178900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36704708-36714707 Glycine max
Glyma.05G178900 10.0kb downstream 10.0kb downstream 31221 true Chr05: 36673487-36704707 Glycine max
Glyma.05G178900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36673487-36683486 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310403 5265 Fabidae View MSA
124050169 5270 Rosid View MSA
123738081 5271 Pentapetalae View MSA
122785756 5272 Eudicot View MSA
122046456 5273 Angiosperm View MSA
121348971 5274 Embryophyte View MSA
123424415 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.5519 0.0 54.8867    
cufflinks 9.70749 0.0 41.5591    
cufflinks 114.734 0.0 2175.8 High High
cufflinks 6.13366 0.0 24.0935    
cufflinks 4.98616 0.0 23.9867    
cufflinks 7.01961 0.0 31.2361    
cufflinks 4.94097 0.0 17.0226    
cufflinks 6.85232 0.0 32.9497    
cufflinks 5.86829 0.0 20.6366    
cufflinks 0.41        
cufflinks 0.478        
cufflinks 3.11       High
cufflinks 0.329       Low
cufflinks 0.298       Low
cufflinks 0.537        
cufflinks 0.602        
cufflinks 0.611        
cufflinks 0.88        
cufflinks 0.725        
cufflinks 0.627        
cufflinks 0.469        
cufflinks 0.687        
cufflinks 0.658        
cufflinks 0.483        
cufflinks 0.604        
cufflinks 0.509        

0 Strain