Gene : Glyma.05G186000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21677 - CRAMPED PROTEIN Genomic Order:  1860
Name:  ? Glyma.05G186000 Secondary Identifier:  ? PAC:30525696
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G186000 0.5kb upstream 0.5kb upstream 4842 true Chr05: 37272954-37277795 Glycine max
Glyma.05G186000 0.5kb upstream 0.5kb upstream 500 false Chr05: 37272954-37273453 Glycine max
Glyma.05G186000 0.5kb downstream 0.5kb downstream 4842 true Chr05: 37273454-37278295 Glycine max
Glyma.05G186000 0.5kb downstream 0.5kb downstream 500 false Chr05: 37277796-37278295 Glycine max
Glyma.05G186000 1.0kb upstream 1.0kb upstream 5342 true Chr05: 37272454-37277795 Glycine max
Glyma.05G186000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37272454-37273453 Glycine max
Glyma.05G186000 1.0kb downstream 1.0kb downstream 5342 true Chr05: 37273454-37278795 Glycine max
Glyma.05G186000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37277796-37278795 Glycine max
Glyma.05G186000 2.0kb upstream 2.0kb upstream 6342 true Chr05: 37271454-37277795 Glycine max
Glyma.05G186000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37271454-37273453 Glycine max
Glyma.05G186000 2.0kb downstream 2.0kb downstream 6342 true Chr05: 37273454-37279795 Glycine max
Glyma.05G186000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37277796-37279795 Glycine max
Glyma.05G186000 5.0kb upstream 5.0kb upstream 9342 true Chr05: 37268454-37277795 Glycine max
Glyma.05G186000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37268454-37273453 Glycine max
Glyma.05G186000 5.0kb downstream 5.0kb downstream 9342 true Chr05: 37273454-37282795 Glycine max
Glyma.05G186000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37277796-37282795 Glycine max
Glyma.05G186000 10.0kb upstream 10.0kb upstream 14342 true Chr05: 37263454-37277795 Glycine max
Glyma.05G186000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37263454-37273453 Glycine max
Glyma.05G186000 10.0kb downstream 10.0kb downstream 14342 true Chr05: 37273454-37287795 Glycine max
Glyma.05G186000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37277796-37287795 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029441 5273 Angiosperm View MSA
122312363 5265 Fabidae View MSA
124063618 5270 Rosid View MSA
123741538 5271 Pentapetalae View MSA
122796808 5272 Eudicot View MSA
121298774 5274 Embryophyte View MSA
123336722 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.21278 0.0 4.81394    
cufflinks 1.60789 0.0 7.73869    
cufflinks 4.85079 0.0 16.6263   High
cufflinks 1.03454 0.0 4.34481    
cufflinks 1.6778 0.0 8.03003    
cufflinks 3.87398 0.0 14.2059   High
cufflinks 1.08472 0.0 4.55905    
cufflinks 0.648017 0.0 4.96214   Low
cufflinks 1.81373 0.0 8.48201    
cufflinks 0.32       Low
cufflinks 1.577       High
cufflinks 1.136        
cufflinks 0.629        
cufflinks 0.632        
cufflinks 1.153        
cufflinks 0.387        
cufflinks 1.257        
cufflinks 0.395        
cufflinks 0.653        
cufflinks 0.201       Low
cufflinks 1.576       High
cufflinks 0.296       Low
cufflinks 0.756        
cufflinks 1.679       High
cufflinks 0.237       Low
cufflinks 1.383       High

0 Strain