Gene : Glyma.05G162800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR27006:SF3 - LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RFK1-RELATED Genomic Order:  1628
Name:  ? Glyma.05G162800 Secondary Identifier:  ? PAC:30523780
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G162800 0.5kb upstream 0.5kb upstream 12276 true Chr05: 35385496-35397771 Glycine max
Glyma.05G162800 0.5kb upstream 0.5kb upstream 500 false Chr05: 35385496-35385995 Glycine max
Glyma.05G162800 0.5kb downstream 0.5kb downstream 12276 true Chr05: 35385996-35398271 Glycine max
Glyma.05G162800 0.5kb downstream 0.5kb downstream 500 false Chr05: 35397772-35398271 Glycine max
Glyma.05G162800 1.0kb upstream 1.0kb upstream 12776 true Chr05: 35384996-35397771 Glycine max
Glyma.05G162800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35384996-35385995 Glycine max
Glyma.05G162800 1.0kb downstream 1.0kb downstream 12776 true Chr05: 35385996-35398771 Glycine max
Glyma.05G162800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35397772-35398771 Glycine max
Glyma.05G162800 2.0kb upstream 2.0kb upstream 13776 true Chr05: 35383996-35397771 Glycine max
Glyma.05G162800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35383996-35385995 Glycine max
Glyma.05G162800 2.0kb downstream 2.0kb downstream 13776 true Chr05: 35385996-35399771 Glycine max
Glyma.05G162800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35397772-35399771 Glycine max
Glyma.05G162800 5.0kb upstream 5.0kb upstream 16776 true Chr05: 35380996-35397771 Glycine max
Glyma.05G162800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35380996-35385995 Glycine max
Glyma.05G162800 5.0kb downstream 5.0kb downstream 16776 true Chr05: 35385996-35402771 Glycine max
Glyma.05G162800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35397772-35402771 Glycine max
Glyma.05G162800 10.0kb upstream 10.0kb upstream 21776 true Chr05: 35375996-35397771 Glycine max
Glyma.05G162800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35375996-35385995 Glycine max
Glyma.05G162800 10.0kb downstream 10.0kb downstream 21776 true Chr05: 35385996-35407771 Glycine max
Glyma.05G162800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35397772-35407771 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310887 5265 Fabidae View MSA
124071299 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.82434 0.0 20.2914    
cufflinks 2.00494 0.0 7.52814    
cufflinks 12.089 0.0 36.2198   High
cufflinks 8.0066 0.0 24.3587   High
cufflinks 0.587742 0.0 3.22044    
cufflinks 0.444212 0.0 2.54867   Low
cufflinks 5.49797 0.0 17.3444    
cufflinks 0.409056 0.0 2.35908   Low
cufflinks 0.651628 0.0 3.44565    
cufflinks 0.399        
cufflinks 0.002     Low Low
cufflinks 4.6       High
cufflinks 0.036     Low  
cufflinks 0.077        
cufflinks 0.028     Low  
cufflinks 2.383        
cufflinks 0.021     Low  
cufflinks 4.564       High
cufflinks 0.808        
cufflinks 2.727        
cufflinks 0.009     Low Low
cufflinks 3.009        
cufflinks 6.462       High
cufflinks 0.007     Low Low
cufflinks 2.692        
cufflinks 0.013     Low Low

0 Strain