Gene : Glyma.05G144400 G. max Wm82.a2.v1
Defline:  (1 of 18) PF07714//PF12819 - Protein tyrosine kinase (Pkinase_Tyr) // Carbohydrate-binding protein of the ER (Malectin_like) Genomic Order:  1444
Name:  ? Glyma.05G144400 Secondary Identifier:  ? PAC:30524395
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G144400 0.5kb upstream 0.5kb upstream 6365 true Chr05: 33820711-33827075 Glycine max
Glyma.05G144400 0.5kb upstream 0.5kb upstream 500 false Chr05: 33826576-33827075 Glycine max
Glyma.05G144400 0.5kb downstream 0.5kb downstream 6365 true Chr05: 33820211-33826575 Glycine max
Glyma.05G144400 0.5kb downstream 0.5kb downstream 500 false Chr05: 33820211-33820710 Glycine max
Glyma.05G144400 1.0kb upstream 1.0kb upstream 6865 true Chr05: 33820711-33827575 Glycine max
Glyma.05G144400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 33826576-33827575 Glycine max
Glyma.05G144400 1.0kb downstream 1.0kb downstream 6865 true Chr05: 33819711-33826575 Glycine max
Glyma.05G144400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33819711-33820710 Glycine max
Glyma.05G144400 2.0kb upstream 2.0kb upstream 7865 true Chr05: 33820711-33828575 Glycine max
Glyma.05G144400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 33826576-33828575 Glycine max
Glyma.05G144400 2.0kb downstream 2.0kb downstream 7865 true Chr05: 33818711-33826575 Glycine max
Glyma.05G144400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33818711-33820710 Glycine max
Glyma.05G144400 5.0kb upstream 5.0kb upstream 10865 true Chr05: 33820711-33831575 Glycine max
Glyma.05G144400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 33826576-33831575 Glycine max
Glyma.05G144400 5.0kb downstream 5.0kb downstream 10865 true Chr05: 33815711-33826575 Glycine max
Glyma.05G144400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33815711-33820710 Glycine max
Glyma.05G144400 10.0kb upstream 10.0kb upstream 15865 true Chr05: 33820711-33836575 Glycine max
Glyma.05G144400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 33826576-33836575 Glycine max
Glyma.05G144400 10.0kb downstream 10.0kb downstream 15865 true Chr05: 33810711-33826575 Glycine max
Glyma.05G144400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33810711-33820710 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298988 5265 Fabidae View MSA
124064056 5270 Rosid View MSA
123739372 5271 Pentapetalae View MSA
122786358 5272 Eudicot View MSA
122049078 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.969142 0.0 4.76295    
cufflinks 0.801565 0.0 4.18629    
cufflinks 1.6564 0.0 6.64294    
cufflinks 1.54919 0.0 4.85851    
cufflinks 1.23926 0.0 6.57522    
cufflinks 0.210845 0.0 1.03339 Low Low
cufflinks 12.5143 0.0 48.217   High
cufflinks 2.86293 0.0 12.9118    
cufflinks 5.79128 0.0 20.2147   High
cufflinks 0.144        
cufflinks 0.376       High
cufflinks 0.351       High
cufflinks 0.211        
cufflinks 0.168        
cufflinks 0.585       High
cufflinks 0.122       Low
cufflinks 0.169        
cufflinks 0.325       High
cufflinks 0.144        
cufflinks 0.151        
cufflinks 0.187        
cufflinks 0.173        
cufflinks 0.101     Low Low
cufflinks 0.273        
cufflinks 0.122       Low
cufflinks 0.163        

0 Strain