Gene : Glyma.05G082900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11709:SF113 - PECTINESTERASE LIKE PROTEIN-RELATED Genomic Order:  829
Name:  ? Glyma.05G082900 Secondary Identifier:  ? PAC:30527063
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G082900 0.5kb upstream 0.5kb upstream 4842 true Chr05: 13192326-13197167 Glycine max
Glyma.05G082900 0.5kb upstream 0.5kb upstream 500 false Chr05: 13192326-13192825 Glycine max
Glyma.05G082900 0.5kb downstream 0.5kb downstream 4842 true Chr05: 13192826-13197667 Glycine max
Glyma.05G082900 0.5kb downstream 0.5kb downstream 500 false Chr05: 13197168-13197667 Glycine max
Glyma.05G082900 1.0kb upstream 1.0kb upstream 5342 true Chr05: 13191826-13197167 Glycine max
Glyma.05G082900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 13191826-13192825 Glycine max
Glyma.05G082900 1.0kb downstream 1.0kb downstream 5342 true Chr05: 13192826-13198167 Glycine max
Glyma.05G082900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 13197168-13198167 Glycine max
Glyma.05G082900 2.0kb upstream 2.0kb upstream 6342 true Chr05: 13190826-13197167 Glycine max
Glyma.05G082900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 13190826-13192825 Glycine max
Glyma.05G082900 2.0kb downstream 2.0kb downstream 6342 true Chr05: 13192826-13199167 Glycine max
Glyma.05G082900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 13197168-13199167 Glycine max
Glyma.05G082900 5.0kb upstream 5.0kb upstream 9342 true Chr05: 13187826-13197167 Glycine max
Glyma.05G082900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 13187826-13192825 Glycine max
Glyma.05G082900 5.0kb downstream 5.0kb downstream 9342 true Chr05: 13192826-13202167 Glycine max
Glyma.05G082900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 13197168-13202167 Glycine max
Glyma.05G082900 10.0kb upstream 10.0kb upstream 14342 true Chr05: 13182826-13197167 Glycine max
Glyma.05G082900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 13182826-13192825 Glycine max
Glyma.05G082900 10.0kb downstream 10.0kb downstream 14342 true Chr05: 13192826-13207167 Glycine max
Glyma.05G082900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 13197168-13207167 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122239172 5265 Fabidae Singleton cluster - no MSA
124051603 5270 Rosid View MSA
123750716 5271 Pentapetalae View MSA
122786567 5272 Eudicot View MSA
122045037 5273 Angiosperm View MSA
121351115 5274 Embryophyte View MSA
123382011 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0640451 0.0 0.265582 Low  
cufflinks 0.0276026 0.0 0.122178 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.014     Low  
cufflinks 0.066     Low High
cufflinks 0.088       High
cufflinks 0.004     Low Low
cufflinks 0.013     Low  
cufflinks 0.004     Low Low
cufflinks 0.008     Low  
cufflinks 0.029     Low  
cufflinks 0.009     Low  
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.003     Low Low
cufflinks 0.022     Low  

0 Strain