Gene : Glyma.05G040700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10641//PTHR10641:SF466 - MYB-LIKE DNA-BINDING PROTEIN MYB Genomic Order:  407
Name:  ? Glyma.05G040700 Secondary Identifier:  ? PAC:30527376
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G040700 0.5kb upstream 0.5kb upstream 2387 true Chr05: 3669813-3672199 Glycine max
Glyma.05G040700 0.5kb upstream 0.5kb upstream 500 false Chr05: 3669813-3670312 Glycine max
Glyma.05G040700 0.5kb downstream 0.5kb downstream 2387 true Chr05: 3670313-3672699 Glycine max
Glyma.05G040700 0.5kb downstream 0.5kb downstream 500 false Chr05: 3672200-3672699 Glycine max
Glyma.05G040700 1.0kb upstream 1.0kb upstream 2887 true Chr05: 3669313-3672199 Glycine max
Glyma.05G040700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3669313-3670312 Glycine max
Glyma.05G040700 1.0kb downstream 1.0kb downstream 2887 true Chr05: 3670313-3673199 Glycine max
Glyma.05G040700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3672200-3673199 Glycine max
Glyma.05G040700 2.0kb upstream 2.0kb upstream 3887 true Chr05: 3668313-3672199 Glycine max
Glyma.05G040700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3668313-3670312 Glycine max
Glyma.05G040700 2.0kb downstream 2.0kb downstream 3887 true Chr05: 3670313-3674199 Glycine max
Glyma.05G040700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3672200-3674199 Glycine max
Glyma.05G040700 5.0kb upstream 5.0kb upstream 6887 true Chr05: 3665313-3672199 Glycine max
Glyma.05G040700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3665313-3670312 Glycine max
Glyma.05G040700 5.0kb downstream 5.0kb downstream 6887 true Chr05: 3670313-3677199 Glycine max
Glyma.05G040700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3672200-3677199 Glycine max
Glyma.05G040700 10.0kb upstream 10.0kb upstream 11887 true Chr05: 3660313-3672199 Glycine max
Glyma.05G040700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3660313-3670312 Glycine max
Glyma.05G040700 10.0kb downstream 10.0kb downstream 11887 true Chr05: 3670313-3682199 Glycine max
Glyma.05G040700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3672200-3682199 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301741 5265 Fabidae View MSA
124070953 5270 Rosid View MSA
123745100 5271 Pentapetalae View MSA
122796774 5272 Eudicot View MSA
122046378 5273 Angiosperm View MSA
121349090 5274 Embryophyte View MSA
123381162 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.120876 0.0 0.476842 Low Low
cufflinks 4.7692 0.0 14.052    
cufflinks 0.45702 0.0 1.70068    
cufflinks 2.31326 0.0 7.5215    
cufflinks 1.16437 0.0 4.10081    
cufflinks 1.47222 0.0 5.07215    
cufflinks 7.46286 0.0 20.8976   High
cufflinks 3.98356 0.0 11.9971    
cufflinks 0.791713 0.0 2.86421    
cufflinks 0.956        
cufflinks 0.112       Low
cufflinks 0.348        
cufflinks 1.012        
cufflinks 0.598        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.716       High
cufflinks 0.269        
cufflinks 0.24        
cufflinks 5.002       High
cufflinks 0.312        
cufflinks 0.458        
cufflinks 0.787        
cufflinks 0.876        
cufflinks 0.102       Low
cufflinks 1.076        
cufflinks 0.426        

0 Strain