Gene : Glyma.05G044100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11669:SF3 - PROTEIN STICHEL-LIKE 2 Genomic Order:  441
Name:  ? Glyma.05G044100 Secondary Identifier:  ? PAC:30526273
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G044100 0.5kb upstream 0.5kb upstream 6466 true Chr05: 3947158-3953623 Glycine max
Glyma.05G044100 0.5kb upstream 0.5kb upstream 500 false Chr05: 3947158-3947657 Glycine max
Glyma.05G044100 0.5kb downstream 0.5kb downstream 6466 true Chr05: 3947658-3954123 Glycine max
Glyma.05G044100 0.5kb downstream 0.5kb downstream 500 false Chr05: 3953624-3954123 Glycine max
Glyma.05G044100 1.0kb upstream 1.0kb upstream 6966 true Chr05: 3946658-3953623 Glycine max
Glyma.05G044100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3946658-3947657 Glycine max
Glyma.05G044100 1.0kb downstream 1.0kb downstream 6966 true Chr05: 3947658-3954623 Glycine max
Glyma.05G044100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3953624-3954623 Glycine max
Glyma.05G044100 2.0kb upstream 2.0kb upstream 7966 true Chr05: 3945658-3953623 Glycine max
Glyma.05G044100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3945658-3947657 Glycine max
Glyma.05G044100 2.0kb downstream 2.0kb downstream 7966 true Chr05: 3947658-3955623 Glycine max
Glyma.05G044100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3953624-3955623 Glycine max
Glyma.05G044100 5.0kb upstream 5.0kb upstream 10966 true Chr05: 3942658-3953623 Glycine max
Glyma.05G044100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3942658-3947657 Glycine max
Glyma.05G044100 5.0kb downstream 5.0kb downstream 10966 true Chr05: 3947658-3958623 Glycine max
Glyma.05G044100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3953624-3958623 Glycine max
Glyma.05G044100 10.0kb upstream 10.0kb upstream 15966 true Chr05: 3937658-3953623 Glycine max
Glyma.05G044100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3937658-3947657 Glycine max
Glyma.05G044100 10.0kb downstream 10.0kb downstream 15966 true Chr05: 3947658-3963623 Glycine max
Glyma.05G044100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3953624-3963623 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311123 5265 Fabidae View MSA
124063569 5270 Rosid View MSA
123738968 5271 Pentapetalae View MSA
122794041 5272 Eudicot View MSA
122048856 5273 Angiosperm View MSA
121350538 5274 Embryophyte View MSA
123381780 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.260744 0.0 1.21301   Low
cufflinks 9.23393 0.0 31.9014   High
cufflinks 0.491895 0.0 2.73484    
cufflinks 2.07783 0.0 7.92879    
cufflinks 2.19202 0.0 8.16449    
cufflinks 0.862201 0.0 4.6592    
cufflinks 11.2451 0.0 39.8343   High
cufflinks 0.635185 0.0 3.35452    
cufflinks 0.443784 0.0 2.57234    
cufflinks 0.207        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.316        
cufflinks 0.079     Low  
cufflinks 0.174        
cufflinks 0.007     Low Low
cufflinks 1.718        
cufflinks 0.007     Low Low
cufflinks 0.503        
cufflinks 1.141        
cufflinks 1.332        
cufflinks 0.003     Low Low
cufflinks 1.63        
cufflinks 1.573        
cufflinks 0.001     Low Low
cufflinks 1.599        
cufflinks 0.015     Low  

0 Strain