Gene : Glyma.05G024400 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR24056:SF228 - CYCLIN-DEPENDENT KINASE-LIKE PROTEIN-RELATED Genomic Order:  244
Name:  ? Glyma.05G024400 Secondary Identifier:  ? PAC:30526931
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G024400 0.5kb upstream 0.5kb upstream 6066 true Chr05: 2120266-2126331 Glycine max
Glyma.05G024400 0.5kb upstream 0.5kb upstream 500 false Chr05: 2120266-2120765 Glycine max
Glyma.05G024400 0.5kb downstream 0.5kb downstream 6066 true Chr05: 2120766-2126831 Glycine max
Glyma.05G024400 0.5kb downstream 0.5kb downstream 500 false Chr05: 2126332-2126831 Glycine max
Glyma.05G024400 1.0kb upstream 1.0kb upstream 6566 true Chr05: 2119766-2126331 Glycine max
Glyma.05G024400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2119766-2120765 Glycine max
Glyma.05G024400 1.0kb downstream 1.0kb downstream 6566 true Chr05: 2120766-2127331 Glycine max
Glyma.05G024400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2126332-2127331 Glycine max
Glyma.05G024400 2.0kb upstream 2.0kb upstream 7566 true Chr05: 2118766-2126331 Glycine max
Glyma.05G024400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2118766-2120765 Glycine max
Glyma.05G024400 2.0kb downstream 2.0kb downstream 7566 true Chr05: 2120766-2128331 Glycine max
Glyma.05G024400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2126332-2128331 Glycine max
Glyma.05G024400 5.0kb upstream 5.0kb upstream 10566 true Chr05: 2115766-2126331 Glycine max
Glyma.05G024400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2115766-2120765 Glycine max
Glyma.05G024400 5.0kb downstream 5.0kb downstream 10566 true Chr05: 2120766-2131331 Glycine max
Glyma.05G024400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2126332-2131331 Glycine max
Glyma.05G024400 10.0kb upstream 10.0kb upstream 15566 true Chr05: 2110766-2126331 Glycine max
Glyma.05G024400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2110766-2120765 Glycine max
Glyma.05G024400 10.0kb downstream 10.0kb downstream 15566 true Chr05: 2120766-2136331 Glycine max
Glyma.05G024400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2126332-2136331 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311006 5265 Fabidae View MSA
124068360 5270 Rosid View MSA
123745787 5271 Pentapetalae View MSA
122787551 5272 Eudicot View MSA
122044027 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310228 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.04294 0.0 4.9827    
cufflinks 1.81088 0.0 7.31458    
cufflinks 0.954797 0.0 4.74423    
cufflinks 1.88557 0.0 7.48545    
cufflinks 0.883742 0.0 4.43315    
cufflinks 0.476393 0.0 2.7586   Low
cufflinks 0.589182 0.0 3.22667    
cufflinks 8.70345 0.0 26.7577   High
cufflinks 1.72766 0.0 7.00186    
cufflinks 0.975        
cufflinks 0.077       Low
cufflinks 0.567        
cufflinks 0.348        
cufflinks 0.029     Low Low
cufflinks 0.026     Low Low
cufflinks 1.115        
cufflinks 0.292        
cufflinks 0.563        
cufflinks 0.686        
cufflinks 1.663       High
cufflinks 0.122        
cufflinks 1.59       High
cufflinks 1.361       High
cufflinks 0.103        
cufflinks 1.095        
cufflinks 0.096        

0 Strain