Gene : Glyma.05G033000 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR26402:SF526 - TWO-COMPONENT RESPONSE REGULATOR ARR15-RELATED Genomic Order:  330
Name:  ? Glyma.05G033000 Secondary Identifier:  ? PAC:30524565
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G033000 0.5kb upstream 0.5kb upstream 3058 true Chr05: 2882073-2885130 Glycine max
Glyma.05G033000 0.5kb upstream 0.5kb upstream 500 false Chr05: 2884631-2885130 Glycine max
Glyma.05G033000 0.5kb downstream 0.5kb downstream 3058 true Chr05: 2881573-2884630 Glycine max
Glyma.05G033000 0.5kb downstream 0.5kb downstream 500 false Chr05: 2881573-2882072 Glycine max
Glyma.05G033000 1.0kb upstream 1.0kb upstream 3558 true Chr05: 2882073-2885630 Glycine max
Glyma.05G033000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2884631-2885630 Glycine max
Glyma.05G033000 1.0kb downstream 1.0kb downstream 3558 true Chr05: 2881073-2884630 Glycine max
Glyma.05G033000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2881073-2882072 Glycine max
Glyma.05G033000 2.0kb upstream 2.0kb upstream 4558 true Chr05: 2882073-2886630 Glycine max
Glyma.05G033000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2884631-2886630 Glycine max
Glyma.05G033000 2.0kb downstream 2.0kb downstream 4558 true Chr05: 2880073-2884630 Glycine max
Glyma.05G033000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2880073-2882072 Glycine max
Glyma.05G033000 5.0kb upstream 5.0kb upstream 7558 true Chr05: 2882073-2889630 Glycine max
Glyma.05G033000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2884631-2889630 Glycine max
Glyma.05G033000 5.0kb downstream 5.0kb downstream 7558 true Chr05: 2877073-2884630 Glycine max
Glyma.05G033000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2877073-2882072 Glycine max
Glyma.05G033000 10.0kb upstream 10.0kb upstream 12558 true Chr05: 2882073-2894630 Glycine max
Glyma.05G033000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2884631-2894630 Glycine max
Glyma.05G033000 10.0kb downstream 10.0kb downstream 12558 true Chr05: 2872073-2884630 Glycine max
Glyma.05G033000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2872073-2882072 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310242 5265 Fabidae View MSA
124068460 5270 Rosid View MSA
123744932 5271 Pentapetalae View MSA
122791853 5272 Eudicot View MSA
122050729 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349796 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.57102 0.0 29.0919    
cufflinks 6.55057 0.0 26.7971    
cufflinks 2.58092 0.0 13.65   Low
cufflinks 5.70453 0.0 24.0561    
cufflinks 8.38528 0.0 31.8585    
cufflinks 4.08717 0.0 19.359    
cufflinks 4.05188 0.0 19.4118    
cufflinks 18.8335 0.0 69.0233   High
cufflinks 15.2413 0.0 58.6459   High
cufflinks 0.939       Low
cufflinks 1.479        
cufflinks 1.277        
cufflinks 2.698       High
cufflinks 1.969        
cufflinks 2.499       High
cufflinks 1.895        
cufflinks 1.23        
cufflinks 1.66        
cufflinks 1.43        
cufflinks 1.554        
cufflinks 2.468       High
cufflinks 1.352        
cufflinks 1.01       Low
cufflinks 1.29        
cufflinks 1.507        
cufflinks 2.081        

0 Strain