Gene : Glyma.05G022400 G. max Wm82.a2.v1
Genomic Order:  224 Name:  ? Glyma.05G022400
Secondary Identifier:  ? PAC:30527451
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G022400 0.5kb upstream 0.5kb upstream 5796 true Chr05: 1961166-1966961 Glycine max
Glyma.05G022400 0.5kb upstream 0.5kb upstream 500 false Chr05: 1966462-1966961 Glycine max
Glyma.05G022400 0.5kb downstream 0.5kb downstream 5796 true Chr05: 1960666-1966461 Glycine max
Glyma.05G022400 0.5kb downstream 0.5kb downstream 500 false Chr05: 1960666-1961165 Glycine max
Glyma.05G022400 1.0kb upstream 1.0kb upstream 6296 true Chr05: 1961166-1967461 Glycine max
Glyma.05G022400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1966462-1967461 Glycine max
Glyma.05G022400 1.0kb downstream 1.0kb downstream 6296 true Chr05: 1960166-1966461 Glycine max
Glyma.05G022400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1960166-1961165 Glycine max
Glyma.05G022400 2.0kb upstream 2.0kb upstream 7296 true Chr05: 1961166-1968461 Glycine max
Glyma.05G022400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1966462-1968461 Glycine max
Glyma.05G022400 2.0kb downstream 2.0kb downstream 7296 true Chr05: 1959166-1966461 Glycine max
Glyma.05G022400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1959166-1961165 Glycine max
Glyma.05G022400 5.0kb upstream 5.0kb upstream 10296 true Chr05: 1961166-1971461 Glycine max
Glyma.05G022400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1966462-1971461 Glycine max
Glyma.05G022400 5.0kb downstream 5.0kb downstream 10296 true Chr05: 1956166-1966461 Glycine max
Glyma.05G022400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1956166-1961165 Glycine max
Glyma.05G022400 10.0kb upstream 10.0kb upstream 15296 true Chr05: 1961166-1976461 Glycine max
Glyma.05G022400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1966462-1976461 Glycine max
Glyma.05G022400 10.0kb downstream 10.0kb downstream 15296 true Chr05: 1951166-1966461 Glycine max
Glyma.05G022400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1951166-1961165 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308955 5265 Fabidae View MSA
124061267 5270 Rosid View MSA
123752707 5271 Pentapetalae View MSA
122790153 5272 Eudicot View MSA
122044586 5273 Angiosperm View MSA
121345884 5274 Embryophyte View MSA
123380284 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.21391 0.0 20.5376    
cufflinks 2.77932 0.0 19.0355    
cufflinks 1.21243 0.0 13.6779   Low
cufflinks 2.74045 0.0 24.0606    
cufflinks 3.71126 0.0 37.6533   High
cufflinks 1.92653 0.0 14.0577    
cufflinks 2.6109 0.0 20.0224    
cufflinks 2.52465 0.0 18.7725    
cufflinks 2.96535 0.0 18.5306    
cufflinks 0.06     Low  
cufflinks 0.006     Low Low
cufflinks 0.105     Low  
cufflinks 0.127       High
cufflinks 0.16       High
cufflinks 0.047     Low  
cufflinks 0.049     Low  
cufflinks 0.025     Low  
cufflinks 0.099     Low  
cufflinks 0.13       High
cufflinks 0.039     Low  
cufflinks 0.01     Low Low
cufflinks 0.043     Low  
cufflinks 0.086     Low  
cufflinks 0.011     Low Low
cufflinks 0.04     Low  
cufflinks 0.01     Low Low

0 Strain