Gene : Cagra.0853s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10744:SF7 - 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC Genomic Order:  1
Name:  ? Cagra.0853s0001 Secondary Identifier:  ? PAC:28904482
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0853s0001 0.5kb upstream 0.5kb upstream 935 true Scaffold853: 1674-2608 Capsella grandiflora
Cagra.0853s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold853: 2109-2608 Capsella grandiflora
Cagra.0853s0001 0.5kb downstream 0.5kb downstream 935 true Scaffold853: 1174-2108 Capsella grandiflora
Cagra.0853s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold853: 1174-1673 Capsella grandiflora
Cagra.0853s0001 1.0kb upstream 1.0kb upstream 1435 true Scaffold853: 1674-3108 Capsella grandiflora
Cagra.0853s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold853: 2109-3108 Capsella grandiflora
Cagra.0853s0001 1.0kb downstream 1.0kb downstream 1435 true Scaffold853: 674-2108 Capsella grandiflora
Cagra.0853s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold853: 674-1673 Capsella grandiflora
Cagra.0853s0001 2.0kb upstream 2.0kb upstream 2435 true Scaffold853: 1674-4108 Capsella grandiflora
Cagra.0853s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold853: 2109-4108 Capsella grandiflora
Cagra.0853s0001 2.0kb downstream 2.0kb downstream 2108 true Scaffold853: 1-2108 Capsella grandiflora
Cagra.0853s0001 2.0kb downstream 2.0kb downstream 1673 false Scaffold853: 1-1673 Capsella grandiflora
Cagra.0853s0001 5.0kb upstream 5.0kb upstream 5435 true Scaffold853: 1674-7108 Capsella grandiflora
Cagra.0853s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold853: 2109-7108 Capsella grandiflora
Cagra.0853s0001 5.0kb downstream 5.0kb downstream 2108 true Scaffold853: 1-2108 Capsella grandiflora
Cagra.0853s0001 5.0kb downstream 5.0kb downstream 1673 false Scaffold853: 1-1673 Capsella grandiflora
Cagra.0853s0001 10.0kb upstream 10.0kb upstream 10435 true Scaffold853: 1674-12108 Capsella grandiflora
Cagra.0853s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold853: 2109-12108 Capsella grandiflora
Cagra.0853s0001 10.0kb downstream 10.0kb downstream 2108 true Scaffold853: 1-2108 Capsella grandiflora
Cagra.0853s0001 10.0kb downstream 10.0kb downstream 1673 false Scaffold853: 1-1673 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366713 5261 Brassicaceae View MSA
123832399 5264 Brassicales-Malvales View MSA
124346149 5266 SBM View MSA
124253303 5268 Malvidae View MSA
124063542 5270 Rosid View MSA
123744369 5271 Pentapetalae View MSA
122786157 5272 Eudicot View MSA
122045320 5273 Angiosperm View MSA
121347348 5274 Embryophyte View MSA
123424165 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain