Protein Domain : IPR001122

Type:  Domain Name:  Flavivirus capsid protein C
Description:  Flaviruses are small, enveloped RNA viruses that use arthropods such as mosquitoes for transmission to their vertebrate hosts, and include Yellow fever virus, West Nile virus, Tick-borne encephalitis virus, Japanese encephalitis virus, and Dengue virus 2[]. Flaviviruses consist of three structural proteins: the core nucleocapsid protein C, and the envelope glycoproteins M () and E. The virion of these viruses is a nucleocapsid covered by a lipoprotein envelope, where the nucleocapsid is a complex of capsid protein C and mRNA. The capsid protein C is a dimeric alpha-helical protein, and its interaction with RNA is critical for the production of viable virus particles []. Short Name:  Flavi_capsidC
Paste the following link

0 Child Features

0 Contains

1 Cross References

Identifier
PF01003

1 Found In

DB identifier Type Name
IPR014412 Family Genome polyprotein, Flavivirus

2 GO Annotations

GO Term Gene Name
GO:0005198 IPR001122
GO:0019028 IPR001122

2 Ontology Annotations

GO Term Gene Name
GO:0005198 IPR001122
GO:0019028 IPR001122

0 Parent Features

2 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
Clevi.0032s0059.1.p PAC:39741703 Cleome violacea 362  
Clevi.0008s1001.1.p PAC:45683446 Cleome violacea 362  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            15378043
            12768036