Gene : Cagra.0402s0016 C. grandiflora v1.1
Defline:  (1 of 2) PTHR35464:SF1 - F18O14.9 Genomic Order:  16
Name:  ? Cagra.0402s0016 Secondary Identifier:  ? PAC:28907981
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0402s0016 0.5kb upstream 0.5kb upstream 2820 true Scaffold402: 55784-58603 Capsella grandiflora
Cagra.0402s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold402: 55784-56283 Capsella grandiflora
Cagra.0402s0016 0.5kb downstream 0.5kb downstream 2820 true Scaffold402: 56284-59103 Capsella grandiflora
Cagra.0402s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold402: 58604-59103 Capsella grandiflora
Cagra.0402s0016 1.0kb upstream 1.0kb upstream 3320 true Scaffold402: 55284-58603 Capsella grandiflora
Cagra.0402s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold402: 55284-56283 Capsella grandiflora
Cagra.0402s0016 1.0kb downstream 1.0kb downstream 3320 true Scaffold402: 56284-59603 Capsella grandiflora
Cagra.0402s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold402: 58604-59603 Capsella grandiflora
Cagra.0402s0016 2.0kb upstream 2.0kb upstream 4320 true Scaffold402: 54284-58603 Capsella grandiflora
Cagra.0402s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold402: 54284-56283 Capsella grandiflora
Cagra.0402s0016 2.0kb downstream 2.0kb downstream 4320 true Scaffold402: 56284-60603 Capsella grandiflora
Cagra.0402s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold402: 58604-60603 Capsella grandiflora
Cagra.0402s0016 5.0kb upstream 5.0kb upstream 7320 true Scaffold402: 51284-58603 Capsella grandiflora
Cagra.0402s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold402: 51284-56283 Capsella grandiflora
Cagra.0402s0016 5.0kb downstream 5.0kb downstream 7320 true Scaffold402: 56284-63603 Capsella grandiflora
Cagra.0402s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold402: 58604-63603 Capsella grandiflora
Cagra.0402s0016 10.0kb upstream 10.0kb upstream 12320 true Scaffold402: 46284-58603 Capsella grandiflora
Cagra.0402s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold402: 46284-56283 Capsella grandiflora
Cagra.0402s0016 10.0kb downstream 10.0kb downstream 12320 true Scaffold402: 56284-68603 Capsella grandiflora
Cagra.0402s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold402: 58604-68603 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377375 5261 Brassicaceae View MSA
123839921 5264 Brassicales-Malvales View MSA
124339703 5266 SBM View MSA
124253506 5268 Malvidae View MSA
124062164 5270 Rosid View MSA
123740083 5271 Pentapetalae View MSA
122790086 5272 Eudicot View MSA
122043322 5273 Angiosperm View MSA
121347201 5274 Embryophyte View MSA
123427704 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain