Gene : Cagra.25917s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12197:SF138 - SET AND MYND DOMAIN-CONTAINING PROTEIN DDB_G0292140 Genomic Order:  3
Name:  ? Cagra.25917s0003 Secondary Identifier:  ? PAC:28917424
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.25917s0003 0.5kb upstream 0.5kb upstream 1916 true Scaffold25917: 5123-7038 Capsella grandiflora
Cagra.25917s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold25917: 5123-5622 Capsella grandiflora
Cagra.25917s0003 0.5kb downstream 0.5kb downstream 1916 true Scaffold25917: 5623-7538 Capsella grandiflora
Cagra.25917s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold25917: 7039-7538 Capsella grandiflora
Cagra.25917s0003 1.0kb upstream 1.0kb upstream 2416 true Scaffold25917: 4623-7038 Capsella grandiflora
Cagra.25917s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold25917: 4623-5622 Capsella grandiflora
Cagra.25917s0003 1.0kb downstream 1.0kb downstream 2416 true Scaffold25917: 5623-8038 Capsella grandiflora
Cagra.25917s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold25917: 7039-8038 Capsella grandiflora
Cagra.25917s0003 2.0kb upstream 2.0kb upstream 3416 true Scaffold25917: 3623-7038 Capsella grandiflora
Cagra.25917s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold25917: 3623-5622 Capsella grandiflora
Cagra.25917s0003 2.0kb downstream 2.0kb downstream 3416 true Scaffold25917: 5623-9038 Capsella grandiflora
Cagra.25917s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold25917: 7039-9038 Capsella grandiflora
Cagra.25917s0003 5.0kb upstream 5.0kb upstream 6416 true Scaffold25917: 623-7038 Capsella grandiflora
Cagra.25917s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold25917: 623-5622 Capsella grandiflora
Cagra.25917s0003 5.0kb downstream 5.0kb downstream 6416 true Scaffold25917: 5623-12038 Capsella grandiflora
Cagra.25917s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold25917: 7039-12038 Capsella grandiflora
Cagra.25917s0003 10.0kb upstream 10.0kb upstream 7038 true Scaffold25917: 1-7038 Capsella grandiflora
Cagra.25917s0003 10.0kb upstream 10.0kb upstream 5622 false Scaffold25917: 1-5622 Capsella grandiflora
Cagra.25917s0003 10.0kb downstream 10.0kb downstream 11416 true Scaffold25917: 5623-17038 Capsella grandiflora
Cagra.25917s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold25917: 7039-17038 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362655 5261 Brassicaceae View MSA
123829436 5264 Brassicales-Malvales View MSA
124336579 5266 SBM View MSA
124242467 5268 Malvidae View MSA
124065059 5270 Rosid View MSA
123739236 5271 Pentapetalae View MSA
122790735 5272 Eudicot View MSA
122047445 5273 Angiosperm View MSA
121345734 5274 Embryophyte View MSA
123425197 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain