Gene : Cagra.0104s0025 C. grandiflora v1.1
Defline:  (1 of 61) PF14368 - Probable lipid transfer (LTP_2) Genomic Order:  25
Name:  ? Cagra.0104s0025 Secondary Identifier:  ? PAC:28906211
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0104s0025 0.5kb upstream 0.5kb upstream 1044 true Scaffold104: 79450-80493 Capsella grandiflora
Cagra.0104s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold104: 79450-79949 Capsella grandiflora
Cagra.0104s0025 0.5kb downstream 0.5kb downstream 1044 true Scaffold104: 79950-80993 Capsella grandiflora
Cagra.0104s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold104: 80494-80993 Capsella grandiflora
Cagra.0104s0025 1.0kb upstream 1.0kb upstream 1544 true Scaffold104: 78950-80493 Capsella grandiflora
Cagra.0104s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold104: 78950-79949 Capsella grandiflora
Cagra.0104s0025 1.0kb downstream 1.0kb downstream 1544 true Scaffold104: 79950-81493 Capsella grandiflora
Cagra.0104s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold104: 80494-81493 Capsella grandiflora
Cagra.0104s0025 2.0kb upstream 2.0kb upstream 2544 true Scaffold104: 77950-80493 Capsella grandiflora
Cagra.0104s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold104: 77950-79949 Capsella grandiflora
Cagra.0104s0025 2.0kb downstream 2.0kb downstream 2544 true Scaffold104: 79950-82493 Capsella grandiflora
Cagra.0104s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold104: 80494-82493 Capsella grandiflora
Cagra.0104s0025 5.0kb upstream 5.0kb upstream 5544 true Scaffold104: 74950-80493 Capsella grandiflora
Cagra.0104s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold104: 74950-79949 Capsella grandiflora
Cagra.0104s0025 5.0kb downstream 5.0kb downstream 5544 true Scaffold104: 79950-85493 Capsella grandiflora
Cagra.0104s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold104: 80494-85493 Capsella grandiflora
Cagra.0104s0025 10.0kb upstream 10.0kb upstream 10544 true Scaffold104: 69950-80493 Capsella grandiflora
Cagra.0104s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold104: 69950-79949 Capsella grandiflora
Cagra.0104s0025 10.0kb downstream 10.0kb downstream 10544 true Scaffold104: 79950-90493 Capsella grandiflora
Cagra.0104s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold104: 80494-90493 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370017 5261 Brassicaceae View MSA
123839110 5264 Brassicales-Malvales View MSA
124350996 5266 SBM View MSA
124250916 5268 Malvidae View MSA
124071320 5270 Rosid View MSA
123749514 5271 Pentapetalae View MSA
122786269 5272 Eudicot View MSA
122049999 5273 Angiosperm View MSA
121351204 5274 Embryophyte View MSA
123382050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain