Gene : Cagra.6400s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12855:SF10 - DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 Genomic Order:  5
Name:  ? Cagra.6400s0005 Secondary Identifier:  ? PAC:28911899
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6400s0005 0.5kb upstream 0.5kb upstream 3900 true Scaffold6400: 26806-30705 Capsella grandiflora
Cagra.6400s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold6400: 26806-27305 Capsella grandiflora
Cagra.6400s0005 0.5kb downstream 0.5kb downstream 3900 true Scaffold6400: 27306-31205 Capsella grandiflora
Cagra.6400s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold6400: 30706-31205 Capsella grandiflora
Cagra.6400s0005 1.0kb upstream 1.0kb upstream 4400 true Scaffold6400: 26306-30705 Capsella grandiflora
Cagra.6400s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold6400: 26306-27305 Capsella grandiflora
Cagra.6400s0005 1.0kb downstream 1.0kb downstream 4400 true Scaffold6400: 27306-31705 Capsella grandiflora
Cagra.6400s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold6400: 30706-31705 Capsella grandiflora
Cagra.6400s0005 2.0kb upstream 2.0kb upstream 5400 true Scaffold6400: 25306-30705 Capsella grandiflora
Cagra.6400s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold6400: 25306-27305 Capsella grandiflora
Cagra.6400s0005 2.0kb downstream 2.0kb downstream 5400 true Scaffold6400: 27306-32705 Capsella grandiflora
Cagra.6400s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold6400: 30706-32705 Capsella grandiflora
Cagra.6400s0005 5.0kb upstream 5.0kb upstream 8400 true Scaffold6400: 22306-30705 Capsella grandiflora
Cagra.6400s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold6400: 22306-27305 Capsella grandiflora
Cagra.6400s0005 5.0kb downstream 5.0kb downstream 8400 true Scaffold6400: 27306-35705 Capsella grandiflora
Cagra.6400s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold6400: 30706-35705 Capsella grandiflora
Cagra.6400s0005 10.0kb upstream 10.0kb upstream 13400 true Scaffold6400: 17306-30705 Capsella grandiflora
Cagra.6400s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold6400: 17306-27305 Capsella grandiflora
Cagra.6400s0005 10.0kb downstream 10.0kb downstream 13400 true Scaffold6400: 27306-40705 Capsella grandiflora
Cagra.6400s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold6400: 30706-40705 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368039 5261 Brassicaceae View MSA
123832830 5264 Brassicales-Malvales View MSA
124345984 5266 SBM View MSA
124252542 5268 Malvidae View MSA
124064017 5270 Rosid View MSA
123739698 5271 Pentapetalae View MSA
122786949 5272 Eudicot View MSA
122041546 5273 Angiosperm View MSA
123429045 5275 Viridiplantae View MSA
121347026 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain