Gene : Cagra.3899s0002 C. grandiflora v1.1
Defline:  (1 of 3) PTHR13301:SF25 - BZIP TRANSCRIPTION FACTOR-LIKE PROTEIN Genomic Order:  2
Name:  ? Cagra.3899s0002 Secondary Identifier:  ? PAC:28913523
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3899s0002 0.5kb upstream 0.5kb upstream 3139 true Scaffold3899: 1671-4809 Capsella grandiflora
Cagra.3899s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3899: 4310-4809 Capsella grandiflora
Cagra.3899s0002 0.5kb downstream 0.5kb downstream 3139 true Scaffold3899: 1171-4309 Capsella grandiflora
Cagra.3899s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3899: 1171-1670 Capsella grandiflora
Cagra.3899s0002 1.0kb upstream 1.0kb upstream 3639 true Scaffold3899: 1671-5309 Capsella grandiflora
Cagra.3899s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3899: 4310-5309 Capsella grandiflora
Cagra.3899s0002 1.0kb downstream 1.0kb downstream 3639 true Scaffold3899: 671-4309 Capsella grandiflora
Cagra.3899s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold3899: 671-1670 Capsella grandiflora
Cagra.3899s0002 2.0kb upstream 2.0kb upstream 4639 true Scaffold3899: 1671-6309 Capsella grandiflora
Cagra.3899s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3899: 4310-6309 Capsella grandiflora
Cagra.3899s0002 2.0kb downstream 2.0kb downstream 4309 true Scaffold3899: 1-4309 Capsella grandiflora
Cagra.3899s0002 2.0kb downstream 2.0kb downstream 1670 false Scaffold3899: 1-1670 Capsella grandiflora
Cagra.3899s0002 5.0kb upstream 5.0kb upstream 7639 true Scaffold3899: 1671-9309 Capsella grandiflora
Cagra.3899s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold3899: 4310-9309 Capsella grandiflora
Cagra.3899s0002 5.0kb downstream 5.0kb downstream 4309 true Scaffold3899: 1-4309 Capsella grandiflora
Cagra.3899s0002 5.0kb downstream 5.0kb downstream 1670 false Scaffold3899: 1-1670 Capsella grandiflora
Cagra.3899s0002 10.0kb upstream 10.0kb upstream 10866 true Scaffold3899: 1671-12536 Capsella grandiflora
Cagra.3899s0002 10.0kb upstream 10.0kb upstream 8227 false Scaffold3899: 4310-12536 Capsella grandiflora
Cagra.3899s0002 10.0kb downstream 10.0kb downstream 4309 true Scaffold3899: 1-4309 Capsella grandiflora
Cagra.3899s0002 10.0kb downstream 10.0kb downstream 1670 false Scaffold3899: 1-1670 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343397 5261 Brassicaceae View MSA
123838404 5264 Brassicales-Malvales View MSA
124349972 5266 SBM View MSA
124238236 5268 Malvidae View MSA
124067455 5270 Rosid View MSA
123741785 5271 Pentapetalae View MSA
122796865 5272 Eudicot View MSA
122048673 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350837 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain