Gene : Cagra.4138s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23421:SF63 - BETA-GALACTOSIDASE 2-RELATED Genomic Order:  4
Name:  ? Cagra.4138s0004 Secondary Identifier:  ? PAC:28902040
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4138s0004 0.5kb upstream 0.5kb upstream 5129 true Scaffold4138: 16131-21259 Capsella grandiflora
Cagra.4138s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold4138: 20760-21259 Capsella grandiflora
Cagra.4138s0004 0.5kb downstream 0.5kb downstream 5129 true Scaffold4138: 15631-20759 Capsella grandiflora
Cagra.4138s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold4138: 15631-16130 Capsella grandiflora
Cagra.4138s0004 1.0kb upstream 1.0kb upstream 5629 true Scaffold4138: 16131-21759 Capsella grandiflora
Cagra.4138s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold4138: 20760-21759 Capsella grandiflora
Cagra.4138s0004 1.0kb downstream 1.0kb downstream 5629 true Scaffold4138: 15131-20759 Capsella grandiflora
Cagra.4138s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold4138: 15131-16130 Capsella grandiflora
Cagra.4138s0004 2.0kb upstream 2.0kb upstream 6629 true Scaffold4138: 16131-22759 Capsella grandiflora
Cagra.4138s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold4138: 20760-22759 Capsella grandiflora
Cagra.4138s0004 2.0kb downstream 2.0kb downstream 6629 true Scaffold4138: 14131-20759 Capsella grandiflora
Cagra.4138s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold4138: 14131-16130 Capsella grandiflora
Cagra.4138s0004 5.0kb upstream 5.0kb upstream 9629 true Scaffold4138: 16131-25759 Capsella grandiflora
Cagra.4138s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold4138: 20760-25759 Capsella grandiflora
Cagra.4138s0004 5.0kb downstream 5.0kb downstream 9629 true Scaffold4138: 11131-20759 Capsella grandiflora
Cagra.4138s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold4138: 11131-16130 Capsella grandiflora
Cagra.4138s0004 10.0kb upstream 10.0kb upstream 14629 true Scaffold4138: 16131-30759 Capsella grandiflora
Cagra.4138s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold4138: 20760-30759 Capsella grandiflora
Cagra.4138s0004 10.0kb downstream 10.0kb downstream 14629 true Scaffold4138: 6131-20759 Capsella grandiflora
Cagra.4138s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold4138: 6131-16130 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372556 5261 Brassicaceae View MSA
123840563 5264 Brassicales-Malvales View MSA
124350808 5266 SBM View MSA
124251438 5268 Malvidae View MSA
124070593 5270 Rosid View MSA
123743472 5271 Pentapetalae View MSA
122770672 5272 Eudicot View MSA
122049621 5273 Angiosperm View MSA
121350261 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain