Gene : Cagra.4095s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR13683:SF287 - ASPARTIC PROTEINASE-LIKE PROTEIN 2-RELATED Genomic Order:  3
Name:  ? Cagra.4095s0003 Secondary Identifier:  ? PAC:28908331
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4095s0003 0.5kb upstream 0.5kb upstream 3732 true Scaffold4095: 4414-8145 Capsella grandiflora
Cagra.4095s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold4095: 4414-4913 Capsella grandiflora
Cagra.4095s0003 0.5kb downstream 0.5kb downstream 3732 true Scaffold4095: 4914-8645 Capsella grandiflora
Cagra.4095s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold4095: 8146-8645 Capsella grandiflora
Cagra.4095s0003 1.0kb upstream 1.0kb upstream 4232 true Scaffold4095: 3914-8145 Capsella grandiflora
Cagra.4095s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold4095: 3914-4913 Capsella grandiflora
Cagra.4095s0003 1.0kb downstream 1.0kb downstream 4232 true Scaffold4095: 4914-9145 Capsella grandiflora
Cagra.4095s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold4095: 8146-9145 Capsella grandiflora
Cagra.4095s0003 2.0kb upstream 2.0kb upstream 5232 true Scaffold4095: 2914-8145 Capsella grandiflora
Cagra.4095s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold4095: 2914-4913 Capsella grandiflora
Cagra.4095s0003 2.0kb downstream 2.0kb downstream 5232 true Scaffold4095: 4914-10145 Capsella grandiflora
Cagra.4095s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold4095: 8146-10145 Capsella grandiflora
Cagra.4095s0003 5.0kb upstream 5.0kb upstream 8145 true Scaffold4095: 1-8145 Capsella grandiflora
Cagra.4095s0003 5.0kb upstream 5.0kb upstream 4913 false Scaffold4095: 1-4913 Capsella grandiflora
Cagra.4095s0003 5.0kb downstream 5.0kb downstream 8232 true Scaffold4095: 4914-13145 Capsella grandiflora
Cagra.4095s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold4095: 8146-13145 Capsella grandiflora
Cagra.4095s0003 10.0kb upstream 10.0kb upstream 8145 true Scaffold4095: 1-8145 Capsella grandiflora
Cagra.4095s0003 10.0kb upstream 10.0kb upstream 4913 false Scaffold4095: 1-4913 Capsella grandiflora
Cagra.4095s0003 10.0kb downstream 10.0kb downstream 11249 true Scaffold4095: 4914-16162 Capsella grandiflora
Cagra.4095s0003 10.0kb downstream 10.0kb downstream 8017 false Scaffold4095: 8146-16162 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041253 5273 Angiosperm View MSA
122360505 5261 Brassicaceae View MSA
123797964 5264 Brassicales-Malvales View MSA
124348392 5266 SBM View MSA
124244545 5268 Malvidae View MSA
124069940 5270 Rosid View MSA
123745330 5271 Pentapetalae View MSA
122795136 5272 Eudicot View MSA
121309821 5274 Embryophyte View MSA
123347473 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain