Gene : Cagra.3528s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12374:SF23 - TRANSCRIPTIONAL ADAPTER ADA2A Genomic Order:  3
Name:  ? Cagra.3528s0003 Secondary Identifier:  ? PAC:28906439
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3528s0003 0.5kb upstream 0.5kb upstream 3843 true Scaffold3528: 3845-7687 Capsella grandiflora
Cagra.3528s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold3528: 3845-4344 Capsella grandiflora
Cagra.3528s0003 0.5kb downstream 0.5kb downstream 3843 true Scaffold3528: 4345-8187 Capsella grandiflora
Cagra.3528s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold3528: 7688-8187 Capsella grandiflora
Cagra.3528s0003 1.0kb upstream 1.0kb upstream 4343 true Scaffold3528: 3345-7687 Capsella grandiflora
Cagra.3528s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold3528: 3345-4344 Capsella grandiflora
Cagra.3528s0003 1.0kb downstream 1.0kb downstream 4343 true Scaffold3528: 4345-8687 Capsella grandiflora
Cagra.3528s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold3528: 7688-8687 Capsella grandiflora
Cagra.3528s0003 2.0kb upstream 2.0kb upstream 5343 true Scaffold3528: 2345-7687 Capsella grandiflora
Cagra.3528s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold3528: 2345-4344 Capsella grandiflora
Cagra.3528s0003 2.0kb downstream 2.0kb downstream 5343 true Scaffold3528: 4345-9687 Capsella grandiflora
Cagra.3528s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold3528: 7688-9687 Capsella grandiflora
Cagra.3528s0003 5.0kb upstream 5.0kb upstream 7687 true Scaffold3528: 1-7687 Capsella grandiflora
Cagra.3528s0003 5.0kb upstream 5.0kb upstream 4344 false Scaffold3528: 1-4344 Capsella grandiflora
Cagra.3528s0003 5.0kb downstream 5.0kb downstream 8343 true Scaffold3528: 4345-12687 Capsella grandiflora
Cagra.3528s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold3528: 7688-12687 Capsella grandiflora
Cagra.3528s0003 10.0kb upstream 10.0kb upstream 7687 true Scaffold3528: 1-7687 Capsella grandiflora
Cagra.3528s0003 10.0kb upstream 10.0kb upstream 4344 false Scaffold3528: 1-4344 Capsella grandiflora
Cagra.3528s0003 10.0kb downstream 10.0kb downstream 13343 true Scaffold3528: 4345-17687 Capsella grandiflora
Cagra.3528s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold3528: 7688-17687 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360579 5261 Brassicaceae View MSA
123828115 5264 Brassicales-Malvales View MSA
124340175 5266 SBM View MSA
124238534 5268 Malvidae View MSA
124070548 5270 Rosid View MSA
123743147 5271 Pentapetalae View MSA
122791432 5272 Eudicot View MSA
122047628 5273 Angiosperm View MSA
121346644 5274 Embryophyte View MSA
123425030 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain