Gene : Cagra.3166s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11607:SF18 - ALPHA-MANNOSIDASE Genomic Order:  4
Name:  ? Cagra.3166s0004 Secondary Identifier:  ? PAC:28899731
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3166s0004 0.5kb upstream 0.5kb upstream 6531 true Scaffold3166: 11610-18140 Capsella grandiflora
Cagra.3166s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold3166: 11610-12109 Capsella grandiflora
Cagra.3166s0004 0.5kb downstream 0.5kb downstream 6531 true Scaffold3166: 12110-18640 Capsella grandiflora
Cagra.3166s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold3166: 18141-18640 Capsella grandiflora
Cagra.3166s0004 1.0kb upstream 1.0kb upstream 7031 true Scaffold3166: 11110-18140 Capsella grandiflora
Cagra.3166s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold3166: 11110-12109 Capsella grandiflora
Cagra.3166s0004 1.0kb downstream 1.0kb downstream 7031 true Scaffold3166: 12110-19140 Capsella grandiflora
Cagra.3166s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold3166: 18141-19140 Capsella grandiflora
Cagra.3166s0004 2.0kb upstream 2.0kb upstream 8031 true Scaffold3166: 10110-18140 Capsella grandiflora
Cagra.3166s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold3166: 10110-12109 Capsella grandiflora
Cagra.3166s0004 2.0kb downstream 2.0kb downstream 8031 true Scaffold3166: 12110-20140 Capsella grandiflora
Cagra.3166s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold3166: 18141-20140 Capsella grandiflora
Cagra.3166s0004 5.0kb upstream 5.0kb upstream 11031 true Scaffold3166: 7110-18140 Capsella grandiflora
Cagra.3166s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold3166: 7110-12109 Capsella grandiflora
Cagra.3166s0004 5.0kb downstream 5.0kb downstream 11031 true Scaffold3166: 12110-23140 Capsella grandiflora
Cagra.3166s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold3166: 18141-23140 Capsella grandiflora
Cagra.3166s0004 10.0kb upstream 10.0kb upstream 16031 true Scaffold3166: 2110-18140 Capsella grandiflora
Cagra.3166s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold3166: 2110-12109 Capsella grandiflora
Cagra.3166s0004 10.0kb downstream 10.0kb downstream 16031 true Scaffold3166: 12110-28140 Capsella grandiflora
Cagra.3166s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold3166: 18141-28140 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363586 5261 Brassicaceae View MSA
123832307 5264 Brassicales-Malvales View MSA
124337648 5266 SBM View MSA
124245807 5268 Malvidae View MSA
124072093 5270 Rosid View MSA
123740156 5271 Pentapetalae View MSA
122794150 5272 Eudicot View MSA
122044684 5273 Angiosperm View MSA
121351343 5274 Embryophyte View MSA
123424648 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain