Gene : Cagra.3126s0023 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11139:SF1 - TRANSFORMATION/TRANSCRIPTION DOMAIN-ASSOCIATED PROTEIN Genomic Order:  23
Name:  ? Cagra.3126s0023 Secondary Identifier:  ? PAC:28902429
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3126s0023 0.5kb upstream 0.5kb upstream 17739 true Scaffold3126: 90366-108104 Capsella grandiflora
Cagra.3126s0023 0.5kb upstream 0.5kb upstream 1 false Scaffold3126: 108104-108104 Capsella grandiflora
Cagra.3126s0023 0.5kb downstream 0.5kb downstream 18238 true Scaffold3126: 89866-108103 Capsella grandiflora
Cagra.3126s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold3126: 89866-90365 Capsella grandiflora
Cagra.3126s0023 1.0kb upstream 1.0kb upstream 17739 true Scaffold3126: 90366-108104 Capsella grandiflora
Cagra.3126s0023 1.0kb upstream 1.0kb upstream 1 false Scaffold3126: 108104-108104 Capsella grandiflora
Cagra.3126s0023 1.0kb downstream 1.0kb downstream 18738 true Scaffold3126: 89366-108103 Capsella grandiflora
Cagra.3126s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold3126: 89366-90365 Capsella grandiflora
Cagra.3126s0023 2.0kb upstream 2.0kb upstream 17739 true Scaffold3126: 90366-108104 Capsella grandiflora
Cagra.3126s0023 2.0kb upstream 2.0kb upstream 1 false Scaffold3126: 108104-108104 Capsella grandiflora
Cagra.3126s0023 2.0kb downstream 2.0kb downstream 19738 true Scaffold3126: 88366-108103 Capsella grandiflora
Cagra.3126s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold3126: 88366-90365 Capsella grandiflora
Cagra.3126s0023 5.0kb upstream 5.0kb upstream 17739 true Scaffold3126: 90366-108104 Capsella grandiflora
Cagra.3126s0023 5.0kb upstream 5.0kb upstream 1 false Scaffold3126: 108104-108104 Capsella grandiflora
Cagra.3126s0023 5.0kb downstream 5.0kb downstream 22738 true Scaffold3126: 85366-108103 Capsella grandiflora
Cagra.3126s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold3126: 85366-90365 Capsella grandiflora
Cagra.3126s0023 10.0kb upstream 10.0kb upstream 17739 true Scaffold3126: 90366-108104 Capsella grandiflora
Cagra.3126s0023 10.0kb upstream 10.0kb upstream 1 false Scaffold3126: 108104-108104 Capsella grandiflora
Cagra.3126s0023 10.0kb downstream 10.0kb downstream 27738 true Scaffold3126: 80366-108103 Capsella grandiflora
Cagra.3126s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold3126: 80366-90365 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027431 5273 Angiosperm View MSA
122377108 5261 Brassicaceae View MSA
123838828 5264 Brassicales-Malvales View MSA
124339696 5266 SBM View MSA
124241713 5268 Malvidae View MSA
124067016 5270 Rosid View MSA
123737923 5271 Pentapetalae View MSA
122791578 5272 Eudicot View MSA
121344769 5274 Embryophyte View MSA
123424018 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain