Gene : Cagra.2654s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31288:SF10 - O-FUCOSYLTRANSFERASE FAMILY PROTEIN Genomic Order:  1
Name:  ? Cagra.2654s0001 Secondary Identifier:  ? PAC:28916862
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2654s0001 0.5kb upstream 0.5kb upstream 4164 true Scaffold2654: 433-4596 Capsella grandiflora
Cagra.2654s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2654: 4097-4596 Capsella grandiflora
Cagra.2654s0001 0.5kb downstream 0.5kb downstream 4096 true Scaffold2654: 1-4096 Capsella grandiflora
Cagra.2654s0001 0.5kb downstream 0.5kb downstream 432 false Scaffold2654: 1-432 Capsella grandiflora
Cagra.2654s0001 1.0kb upstream 1.0kb upstream 4664 true Scaffold2654: 433-5096 Capsella grandiflora
Cagra.2654s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold2654: 4097-5096 Capsella grandiflora
Cagra.2654s0001 1.0kb downstream 1.0kb downstream 4096 true Scaffold2654: 1-4096 Capsella grandiflora
Cagra.2654s0001 1.0kb downstream 1.0kb downstream 432 false Scaffold2654: 1-432 Capsella grandiflora
Cagra.2654s0001 2.0kb upstream 2.0kb upstream 5664 true Scaffold2654: 433-6096 Capsella grandiflora
Cagra.2654s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold2654: 4097-6096 Capsella grandiflora
Cagra.2654s0001 2.0kb downstream 2.0kb downstream 4096 true Scaffold2654: 1-4096 Capsella grandiflora
Cagra.2654s0001 2.0kb downstream 2.0kb downstream 432 false Scaffold2654: 1-432 Capsella grandiflora
Cagra.2654s0001 5.0kb upstream 5.0kb upstream 8664 true Scaffold2654: 433-9096 Capsella grandiflora
Cagra.2654s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold2654: 4097-9096 Capsella grandiflora
Cagra.2654s0001 5.0kb downstream 5.0kb downstream 4096 true Scaffold2654: 1-4096 Capsella grandiflora
Cagra.2654s0001 5.0kb downstream 5.0kb downstream 432 false Scaffold2654: 1-432 Capsella grandiflora
Cagra.2654s0001 10.0kb upstream 10.0kb upstream 13664 true Scaffold2654: 433-14096 Capsella grandiflora
Cagra.2654s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold2654: 4097-14096 Capsella grandiflora
Cagra.2654s0001 10.0kb downstream 10.0kb downstream 4096 true Scaffold2654: 1-4096 Capsella grandiflora
Cagra.2654s0001 10.0kb downstream 10.0kb downstream 432 false Scaffold2654: 1-432 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375772 5261 Brassicaceae View MSA
123801050 5264 Brassicales-Malvales View MSA
124298395 5266 SBM View MSA
124243953 5268 Malvidae View MSA
124060500 5270 Rosid View MSA
123747163 5271 Pentapetalae View MSA
122792836 5272 Eudicot View MSA
122049043 5273 Angiosperm View MSA
121350894 5274 Embryophyte View MSA
123381927 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain