Gene : Cagra.2848s0055 C. grandiflora v1.1
Defline:  (1 of 34) KOG4412 - 26S proteasome regulatory complex, subunit PSMD10 Genomic Order:  55
Name:  ? Cagra.2848s0055 Secondary Identifier:  ? PAC:28919662
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2848s0055 0.5kb upstream 0.5kb upstream 3410 true Scaffold2848: 230789-234198 Capsella grandiflora
Cagra.2848s0055 0.5kb upstream 0.5kb upstream 500 false Scaffold2848: 233699-234198 Capsella grandiflora
Cagra.2848s0055 0.5kb downstream 0.5kb downstream 3410 true Scaffold2848: 230289-233698 Capsella grandiflora
Cagra.2848s0055 0.5kb downstream 0.5kb downstream 500 false Scaffold2848: 230289-230788 Capsella grandiflora
Cagra.2848s0055 1.0kb upstream 1.0kb upstream 3910 true Scaffold2848: 230789-234698 Capsella grandiflora
Cagra.2848s0055 1.0kb upstream 1.0kb upstream 1000 false Scaffold2848: 233699-234698 Capsella grandiflora
Cagra.2848s0055 1.0kb downstream 1.0kb downstream 3910 true Scaffold2848: 229789-233698 Capsella grandiflora
Cagra.2848s0055 1.0kb downstream 1.0kb downstream 1000 false Scaffold2848: 229789-230788 Capsella grandiflora
Cagra.2848s0055 2.0kb upstream 2.0kb upstream 4910 true Scaffold2848: 230789-235698 Capsella grandiflora
Cagra.2848s0055 2.0kb upstream 2.0kb upstream 2000 false Scaffold2848: 233699-235698 Capsella grandiflora
Cagra.2848s0055 2.0kb downstream 2.0kb downstream 4910 true Scaffold2848: 228789-233698 Capsella grandiflora
Cagra.2848s0055 2.0kb downstream 2.0kb downstream 2000 false Scaffold2848: 228789-230788 Capsella grandiflora
Cagra.2848s0055 5.0kb upstream 5.0kb upstream 7910 true Scaffold2848: 230789-238698 Capsella grandiflora
Cagra.2848s0055 5.0kb upstream 5.0kb upstream 5000 false Scaffold2848: 233699-238698 Capsella grandiflora
Cagra.2848s0055 5.0kb downstream 5.0kb downstream 7910 true Scaffold2848: 225789-233698 Capsella grandiflora
Cagra.2848s0055 5.0kb downstream 5.0kb downstream 5000 false Scaffold2848: 225789-230788 Capsella grandiflora
Cagra.2848s0055 10.0kb upstream 10.0kb upstream 12910 true Scaffold2848: 230789-243698 Capsella grandiflora
Cagra.2848s0055 10.0kb upstream 10.0kb upstream 10000 false Scaffold2848: 233699-243698 Capsella grandiflora
Cagra.2848s0055 10.0kb downstream 10.0kb downstream 12910 true Scaffold2848: 220789-233698 Capsella grandiflora
Cagra.2848s0055 10.0kb downstream 10.0kb downstream 10000 false Scaffold2848: 220789-230788 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381613 5261 Brassicaceae View MSA
123834473 5264 Brassicales-Malvales View MSA
124338398 5266 SBM View MSA
124250431 5268 Malvidae View MSA
124065339 5270 Rosid View MSA
123745814 5271 Pentapetalae View MSA
122792520 5272 Eudicot View MSA
122050573 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348775 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain