Gene : Cagra.2438s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10566:SF74 - ABC TRANSPORTER-LIKE Genomic Order:  6
Name:  ? Cagra.2438s0006 Secondary Identifier:  ? PAC:28909539
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2438s0006 0.5kb upstream 0.5kb upstream 5283 true Scaffold2438: 11318-16600 Capsella grandiflora
Cagra.2438s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold2438: 16101-16600 Capsella grandiflora
Cagra.2438s0006 0.5kb downstream 0.5kb downstream 5283 true Scaffold2438: 10818-16100 Capsella grandiflora
Cagra.2438s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold2438: 10818-11317 Capsella grandiflora
Cagra.2438s0006 1.0kb upstream 1.0kb upstream 5783 true Scaffold2438: 11318-17100 Capsella grandiflora
Cagra.2438s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold2438: 16101-17100 Capsella grandiflora
Cagra.2438s0006 1.0kb downstream 1.0kb downstream 5783 true Scaffold2438: 10318-16100 Capsella grandiflora
Cagra.2438s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold2438: 10318-11317 Capsella grandiflora
Cagra.2438s0006 2.0kb upstream 2.0kb upstream 6783 true Scaffold2438: 11318-18100 Capsella grandiflora
Cagra.2438s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold2438: 16101-18100 Capsella grandiflora
Cagra.2438s0006 2.0kb downstream 2.0kb downstream 6783 true Scaffold2438: 9318-16100 Capsella grandiflora
Cagra.2438s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold2438: 9318-11317 Capsella grandiflora
Cagra.2438s0006 5.0kb upstream 5.0kb upstream 9783 true Scaffold2438: 11318-21100 Capsella grandiflora
Cagra.2438s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold2438: 16101-21100 Capsella grandiflora
Cagra.2438s0006 5.0kb downstream 5.0kb downstream 9783 true Scaffold2438: 6318-16100 Capsella grandiflora
Cagra.2438s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold2438: 6318-11317 Capsella grandiflora
Cagra.2438s0006 10.0kb upstream 10.0kb upstream 14783 true Scaffold2438: 11318-26100 Capsella grandiflora
Cagra.2438s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold2438: 16101-26100 Capsella grandiflora
Cagra.2438s0006 10.0kb downstream 10.0kb downstream 14783 true Scaffold2438: 1318-16100 Capsella grandiflora
Cagra.2438s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold2438: 1318-11317 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361767 5261 Brassicaceae View MSA
123832626 5264 Brassicales-Malvales View MSA
124342933 5266 SBM View MSA
124236973 5268 Malvidae View MSA
124074806 5270 Rosid View MSA
123743170 5271 Pentapetalae View MSA
122792843 5272 Eudicot View MSA
122045462 5273 Angiosperm View MSA
121346886 5274 Embryophyte View MSA
123424960 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain