Gene : Cagra.2471s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22967//PTHR22967:SF67 - SERINE/THREONINE PROTEIN KINASE Genomic Order:  11
Name:  ? Cagra.2471s0011 Secondary Identifier:  ? PAC:28915171
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2471s0011 0.5kb upstream 0.5kb upstream 3698 true Scaffold2471: 35006-38703 Capsella grandiflora
Cagra.2471s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold2471: 38204-38703 Capsella grandiflora
Cagra.2471s0011 0.5kb downstream 0.5kb downstream 3698 true Scaffold2471: 34506-38203 Capsella grandiflora
Cagra.2471s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold2471: 34506-35005 Capsella grandiflora
Cagra.2471s0011 1.0kb upstream 1.0kb upstream 4198 true Scaffold2471: 35006-39203 Capsella grandiflora
Cagra.2471s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold2471: 38204-39203 Capsella grandiflora
Cagra.2471s0011 1.0kb downstream 1.0kb downstream 4198 true Scaffold2471: 34006-38203 Capsella grandiflora
Cagra.2471s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold2471: 34006-35005 Capsella grandiflora
Cagra.2471s0011 2.0kb upstream 2.0kb upstream 5198 true Scaffold2471: 35006-40203 Capsella grandiflora
Cagra.2471s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold2471: 38204-40203 Capsella grandiflora
Cagra.2471s0011 2.0kb downstream 2.0kb downstream 5198 true Scaffold2471: 33006-38203 Capsella grandiflora
Cagra.2471s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold2471: 33006-35005 Capsella grandiflora
Cagra.2471s0011 5.0kb upstream 5.0kb upstream 8198 true Scaffold2471: 35006-43203 Capsella grandiflora
Cagra.2471s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold2471: 38204-43203 Capsella grandiflora
Cagra.2471s0011 5.0kb downstream 5.0kb downstream 8198 true Scaffold2471: 30006-38203 Capsella grandiflora
Cagra.2471s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold2471: 30006-35005 Capsella grandiflora
Cagra.2471s0011 10.0kb upstream 10.0kb upstream 13198 true Scaffold2471: 35006-48203 Capsella grandiflora
Cagra.2471s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold2471: 38204-48203 Capsella grandiflora
Cagra.2471s0011 10.0kb downstream 10.0kb downstream 13198 true Scaffold2471: 25006-38203 Capsella grandiflora
Cagra.2471s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold2471: 25006-35005 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361581 5261 Brassicaceae View MSA
123828182 5264 Brassicales-Malvales View MSA
124341630 5266 SBM View MSA
124238810 5268 Malvidae View MSA
124073084 5270 Rosid View MSA
123750093 5271 Pentapetalae View MSA
122787323 5272 Eudicot View MSA
122043407 5273 Angiosperm View MSA
121344619 5274 Embryophyte View MSA
123427772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain