Gene : Cagra.2231s0027 C. grandiflora v1.1
Defline:  (1 of 4) 6.1.1.18 - Glutamine--tRNA ligase / Glutaminyl-tRNA synthetase Genomic Order:  27
Name:  ? Cagra.2231s0027 Secondary Identifier:  ? PAC:28900269
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora TRNA-CHARGING-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2231s0027 0.5kb upstream 0.5kb upstream 5818 true Scaffold2231: 114568-120385 Capsella grandiflora
Cagra.2231s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold2231: 119886-120385 Capsella grandiflora
Cagra.2231s0027 0.5kb downstream 0.5kb downstream 5818 true Scaffold2231: 114068-119885 Capsella grandiflora
Cagra.2231s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold2231: 114068-114567 Capsella grandiflora
Cagra.2231s0027 1.0kb upstream 1.0kb upstream 6318 true Scaffold2231: 114568-120885 Capsella grandiflora
Cagra.2231s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold2231: 119886-120885 Capsella grandiflora
Cagra.2231s0027 1.0kb downstream 1.0kb downstream 6318 true Scaffold2231: 113568-119885 Capsella grandiflora
Cagra.2231s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold2231: 113568-114567 Capsella grandiflora
Cagra.2231s0027 2.0kb upstream 2.0kb upstream 7318 true Scaffold2231: 114568-121885 Capsella grandiflora
Cagra.2231s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold2231: 119886-121885 Capsella grandiflora
Cagra.2231s0027 2.0kb downstream 2.0kb downstream 7318 true Scaffold2231: 112568-119885 Capsella grandiflora
Cagra.2231s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold2231: 112568-114567 Capsella grandiflora
Cagra.2231s0027 5.0kb upstream 5.0kb upstream 8328 true Scaffold2231: 114568-122895 Capsella grandiflora
Cagra.2231s0027 5.0kb upstream 5.0kb upstream 3010 false Scaffold2231: 119886-122895 Capsella grandiflora
Cagra.2231s0027 5.0kb downstream 5.0kb downstream 10318 true Scaffold2231: 109568-119885 Capsella grandiflora
Cagra.2231s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold2231: 109568-114567 Capsella grandiflora
Cagra.2231s0027 10.0kb upstream 10.0kb upstream 8328 true Scaffold2231: 114568-122895 Capsella grandiflora
Cagra.2231s0027 10.0kb upstream 10.0kb upstream 3010 false Scaffold2231: 119886-122895 Capsella grandiflora
Cagra.2231s0027 10.0kb downstream 10.0kb downstream 15318 true Scaffold2231: 104568-119885 Capsella grandiflora
Cagra.2231s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold2231: 104568-114567 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369642 5261 Brassicaceae View MSA
123834323 5264 Brassicales-Malvales View MSA
124337419 5266 SBM View MSA
124240630 5268 Malvidae View MSA
124062151 5270 Rosid View MSA
123744952 5271 Pentapetalae View MSA
122789610 5272 Eudicot View MSA
122046880 5273 Angiosperm View MSA
121346731 5274 Embryophyte View MSA
123424701 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain