Gene : Cagra.2093s0016 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10983:SF26 - 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 3 Genomic Order:  16
Name:  ? Cagra.2093s0016 Secondary Identifier:  ? PAC:28899554
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY0-1319 Capsella grandiflora pathologic  
Cgrandiflora PWY4FS-7 Capsella grandiflora pathologic  
Cgrandiflora PWY-7411 Capsella grandiflora pathologic  
Cgrandiflora PWY-7417 Capsella grandiflora pathologic  
Cgrandiflora TRIGLSYN-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2093s0016 0.5kb upstream 0.5kb upstream 2592 true Scaffold2093: 61803-64394 Capsella grandiflora
Cagra.2093s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold2093: 63895-64394 Capsella grandiflora
Cagra.2093s0016 0.5kb downstream 0.5kb downstream 2592 true Scaffold2093: 61303-63894 Capsella grandiflora
Cagra.2093s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold2093: 61303-61802 Capsella grandiflora
Cagra.2093s0016 1.0kb upstream 1.0kb upstream 3092 true Scaffold2093: 61803-64894 Capsella grandiflora
Cagra.2093s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold2093: 63895-64894 Capsella grandiflora
Cagra.2093s0016 1.0kb downstream 1.0kb downstream 3092 true Scaffold2093: 60803-63894 Capsella grandiflora
Cagra.2093s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold2093: 60803-61802 Capsella grandiflora
Cagra.2093s0016 2.0kb upstream 2.0kb upstream 4092 true Scaffold2093: 61803-65894 Capsella grandiflora
Cagra.2093s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold2093: 63895-65894 Capsella grandiflora
Cagra.2093s0016 2.0kb downstream 2.0kb downstream 4092 true Scaffold2093: 59803-63894 Capsella grandiflora
Cagra.2093s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold2093: 59803-61802 Capsella grandiflora
Cagra.2093s0016 5.0kb upstream 5.0kb upstream 4813 true Scaffold2093: 61803-66615 Capsella grandiflora
Cagra.2093s0016 5.0kb upstream 5.0kb upstream 2721 false Scaffold2093: 63895-66615 Capsella grandiflora
Cagra.2093s0016 5.0kb downstream 5.0kb downstream 7092 true Scaffold2093: 56803-63894 Capsella grandiflora
Cagra.2093s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold2093: 56803-61802 Capsella grandiflora
Cagra.2093s0016 10.0kb upstream 10.0kb upstream 4813 true Scaffold2093: 61803-66615 Capsella grandiflora
Cagra.2093s0016 10.0kb upstream 10.0kb upstream 2721 false Scaffold2093: 63895-66615 Capsella grandiflora
Cagra.2093s0016 10.0kb downstream 10.0kb downstream 12092 true Scaffold2093: 51803-63894 Capsella grandiflora
Cagra.2093s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold2093: 51803-61802 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028069 5273 Angiosperm View MSA
122373400 5261 Brassicaceae View MSA
123833102 5264 Brassicales-Malvales View MSA
124341197 5266 SBM View MSA
124244729 5268 Malvidae View MSA
124037222 5270 Rosid View MSA
123753579 5271 Pentapetalae View MSA
122775158 5272 Eudicot View MSA
121297614 5274 Embryophyte View MSA
123335652 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain