Gene : Cagra.1742s0032 C. grandiflora v1.1
Defline:  (1 of 6) PF13259 - Protein of unknown function (DUF4050) (DUF4050) Genomic Order:  32
Name:  ? Cagra.1742s0032 Secondary Identifier:  ? PAC:28910594
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1742s0032 0.5kb upstream 0.5kb upstream 2328 true Scaffold1742: 131132-133459 Capsella grandiflora
Cagra.1742s0032 0.5kb upstream 0.5kb upstream 500 false Scaffold1742: 131132-131631 Capsella grandiflora
Cagra.1742s0032 0.5kb downstream 0.5kb downstream 2328 true Scaffold1742: 131632-133959 Capsella grandiflora
Cagra.1742s0032 0.5kb downstream 0.5kb downstream 500 false Scaffold1742: 133460-133959 Capsella grandiflora
Cagra.1742s0032 1.0kb upstream 1.0kb upstream 2828 true Scaffold1742: 130632-133459 Capsella grandiflora
Cagra.1742s0032 1.0kb upstream 1.0kb upstream 1000 false Scaffold1742: 130632-131631 Capsella grandiflora
Cagra.1742s0032 1.0kb downstream 1.0kb downstream 2828 true Scaffold1742: 131632-134459 Capsella grandiflora
Cagra.1742s0032 1.0kb downstream 1.0kb downstream 1000 false Scaffold1742: 133460-134459 Capsella grandiflora
Cagra.1742s0032 2.0kb upstream 2.0kb upstream 3828 true Scaffold1742: 129632-133459 Capsella grandiflora
Cagra.1742s0032 2.0kb upstream 2.0kb upstream 2000 false Scaffold1742: 129632-131631 Capsella grandiflora
Cagra.1742s0032 2.0kb downstream 2.0kb downstream 3828 true Scaffold1742: 131632-135459 Capsella grandiflora
Cagra.1742s0032 2.0kb downstream 2.0kb downstream 2000 false Scaffold1742: 133460-135459 Capsella grandiflora
Cagra.1742s0032 5.0kb upstream 5.0kb upstream 6828 true Scaffold1742: 126632-133459 Capsella grandiflora
Cagra.1742s0032 5.0kb upstream 5.0kb upstream 5000 false Scaffold1742: 126632-131631 Capsella grandiflora
Cagra.1742s0032 5.0kb downstream 5.0kb downstream 6828 true Scaffold1742: 131632-138459 Capsella grandiflora
Cagra.1742s0032 5.0kb downstream 5.0kb downstream 5000 false Scaffold1742: 133460-138459 Capsella grandiflora
Cagra.1742s0032 10.0kb upstream 10.0kb upstream 11828 true Scaffold1742: 121632-133459 Capsella grandiflora
Cagra.1742s0032 10.0kb upstream 10.0kb upstream 10000 false Scaffold1742: 121632-131631 Capsella grandiflora
Cagra.1742s0032 10.0kb downstream 10.0kb downstream 11828 true Scaffold1742: 131632-143459 Capsella grandiflora
Cagra.1742s0032 10.0kb downstream 10.0kb downstream 10000 false Scaffold1742: 133460-143459 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363929 5261 Brassicaceae View MSA
123839655 5264 Brassicales-Malvales View MSA
124338127 5266 SBM View MSA
124249664 5268 Malvidae View MSA
124069414 5270 Rosid View MSA
123751725 5271 Pentapetalae View MSA
122774149 5272 Eudicot View MSA
122042396 5273 Angiosperm View MSA
121349400 5274 Embryophyte View MSA
123427795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain