Gene : Cagra.1777s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22298:SF28 - ENDOGLUCANASE 4-RELATED Genomic Order:  2
Name:  ? Cagra.1777s0002 Secondary Identifier:  ? PAC:28910335
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1777s0002 0.5kb upstream 0.5kb upstream 4380 true Scaffold1777: 3030-7409 Capsella grandiflora
Cagra.1777s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1777: 3030-3529 Capsella grandiflora
Cagra.1777s0002 0.5kb downstream 0.5kb downstream 4380 true Scaffold1777: 3530-7909 Capsella grandiflora
Cagra.1777s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1777: 7410-7909 Capsella grandiflora
Cagra.1777s0002 1.0kb upstream 1.0kb upstream 4880 true Scaffold1777: 2530-7409 Capsella grandiflora
Cagra.1777s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1777: 2530-3529 Capsella grandiflora
Cagra.1777s0002 1.0kb downstream 1.0kb downstream 4880 true Scaffold1777: 3530-8409 Capsella grandiflora
Cagra.1777s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1777: 7410-8409 Capsella grandiflora
Cagra.1777s0002 2.0kb upstream 2.0kb upstream 5880 true Scaffold1777: 1530-7409 Capsella grandiflora
Cagra.1777s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1777: 1530-3529 Capsella grandiflora
Cagra.1777s0002 2.0kb downstream 2.0kb downstream 5880 true Scaffold1777: 3530-9409 Capsella grandiflora
Cagra.1777s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1777: 7410-9409 Capsella grandiflora
Cagra.1777s0002 5.0kb upstream 5.0kb upstream 7409 true Scaffold1777: 1-7409 Capsella grandiflora
Cagra.1777s0002 5.0kb upstream 5.0kb upstream 3529 false Scaffold1777: 1-3529 Capsella grandiflora
Cagra.1777s0002 5.0kb downstream 5.0kb downstream 8880 true Scaffold1777: 3530-12409 Capsella grandiflora
Cagra.1777s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1777: 7410-12409 Capsella grandiflora
Cagra.1777s0002 10.0kb upstream 10.0kb upstream 7409 true Scaffold1777: 1-7409 Capsella grandiflora
Cagra.1777s0002 10.0kb upstream 10.0kb upstream 3529 false Scaffold1777: 1-3529 Capsella grandiflora
Cagra.1777s0002 10.0kb downstream 10.0kb downstream 13880 true Scaffold1777: 3530-17409 Capsella grandiflora
Cagra.1777s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold1777: 7410-17409 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376344 5261 Brassicaceae View MSA
123831253 5264 Brassicales-Malvales View MSA
124351007 5266 SBM View MSA
124243327 5268 Malvidae View MSA
124074876 5270 Rosid View MSA
123753094 5271 Pentapetalae View MSA
122792910 5272 Eudicot View MSA
122045461 5273 Angiosperm View MSA
121349892 5274 Embryophyte View MSA
123381487 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain