Gene : Cagra.1671s0103 C. grandiflora v1.1
Defline:  (1 of 54) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  103
Name:  ? Cagra.1671s0103 Secondary Identifier:  ? PAC:28914224
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0103 0.5kb upstream 0.5kb upstream 2884 true Scaffold1671: 396557-399440 Capsella grandiflora
Cagra.1671s0103 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 398941-399440 Capsella grandiflora
Cagra.1671s0103 0.5kb downstream 0.5kb downstream 2884 true Scaffold1671: 396057-398940 Capsella grandiflora
Cagra.1671s0103 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 396057-396556 Capsella grandiflora
Cagra.1671s0103 1.0kb upstream 1.0kb upstream 3384 true Scaffold1671: 396557-399940 Capsella grandiflora
Cagra.1671s0103 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 398941-399940 Capsella grandiflora
Cagra.1671s0103 1.0kb downstream 1.0kb downstream 3384 true Scaffold1671: 395557-398940 Capsella grandiflora
Cagra.1671s0103 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 395557-396556 Capsella grandiflora
Cagra.1671s0103 2.0kb upstream 2.0kb upstream 4384 true Scaffold1671: 396557-400940 Capsella grandiflora
Cagra.1671s0103 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 398941-400940 Capsella grandiflora
Cagra.1671s0103 2.0kb downstream 2.0kb downstream 4384 true Scaffold1671: 394557-398940 Capsella grandiflora
Cagra.1671s0103 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 394557-396556 Capsella grandiflora
Cagra.1671s0103 5.0kb upstream 5.0kb upstream 7384 true Scaffold1671: 396557-403940 Capsella grandiflora
Cagra.1671s0103 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 398941-403940 Capsella grandiflora
Cagra.1671s0103 5.0kb downstream 5.0kb downstream 7384 true Scaffold1671: 391557-398940 Capsella grandiflora
Cagra.1671s0103 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 391557-396556 Capsella grandiflora
Cagra.1671s0103 10.0kb upstream 10.0kb upstream 12384 true Scaffold1671: 396557-408940 Capsella grandiflora
Cagra.1671s0103 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 398941-408940 Capsella grandiflora
Cagra.1671s0103 10.0kb downstream 10.0kb downstream 12384 true Scaffold1671: 386557-398940 Capsella grandiflora
Cagra.1671s0103 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 386557-396556 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364822 5261 Brassicaceae View MSA
123834441 5264 Brassicales-Malvales View MSA
124346040 5266 SBM View MSA
124242384 5268 Malvidae View MSA
124072779 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain