Gene : Cagra.1383s0038 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15184//PTHR15184:SF52 - ATP SYNTHASE Genomic Order:  38
Name:  ? Cagra.1383s0038 Secondary Identifier:  ? PAC:28901793
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1383s0038 0.5kb upstream 0.5kb upstream 4872 true Scaffold1383: 121838-126709 Capsella grandiflora
Cagra.1383s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold1383: 126210-126709 Capsella grandiflora
Cagra.1383s0038 0.5kb downstream 0.5kb downstream 4872 true Scaffold1383: 121338-126209 Capsella grandiflora
Cagra.1383s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold1383: 121338-121837 Capsella grandiflora
Cagra.1383s0038 1.0kb upstream 1.0kb upstream 5372 true Scaffold1383: 121838-127209 Capsella grandiflora
Cagra.1383s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold1383: 126210-127209 Capsella grandiflora
Cagra.1383s0038 1.0kb downstream 1.0kb downstream 5372 true Scaffold1383: 120838-126209 Capsella grandiflora
Cagra.1383s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold1383: 120838-121837 Capsella grandiflora
Cagra.1383s0038 2.0kb upstream 2.0kb upstream 6372 true Scaffold1383: 121838-128209 Capsella grandiflora
Cagra.1383s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold1383: 126210-128209 Capsella grandiflora
Cagra.1383s0038 2.0kb downstream 2.0kb downstream 6372 true Scaffold1383: 119838-126209 Capsella grandiflora
Cagra.1383s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold1383: 119838-121837 Capsella grandiflora
Cagra.1383s0038 5.0kb upstream 5.0kb upstream 9372 true Scaffold1383: 121838-131209 Capsella grandiflora
Cagra.1383s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold1383: 126210-131209 Capsella grandiflora
Cagra.1383s0038 5.0kb downstream 5.0kb downstream 9372 true Scaffold1383: 116838-126209 Capsella grandiflora
Cagra.1383s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold1383: 116838-121837 Capsella grandiflora
Cagra.1383s0038 10.0kb upstream 10.0kb upstream 14372 true Scaffold1383: 121838-136209 Capsella grandiflora
Cagra.1383s0038 10.0kb upstream 10.0kb upstream 10000 false Scaffold1383: 126210-136209 Capsella grandiflora
Cagra.1383s0038 10.0kb downstream 10.0kb downstream 14372 true Scaffold1383: 111838-126209 Capsella grandiflora
Cagra.1383s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold1383: 111838-121837 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375513 5261 Brassicaceae View MSA
123835921 5264 Brassicales-Malvales View MSA
124342304 5266 SBM View MSA
124248961 5268 Malvidae View MSA
124071392 5270 Rosid View MSA
123743480 5271 Pentapetalae View MSA
122794276 5272 Eudicot View MSA
122046157 5273 Angiosperm View MSA
121350179 5274 Embryophyte View MSA
123423759 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain